Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDRT1O95170 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.56■□□□□ 0.08
CDRT1O95170 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.56■□□□□ 0.08
CDRT1O95170 AP003071.4-201ENST00000562276 1284 ntBASIC15.56■□□□□ 0.08
CDRT1O95170 AP005242.2-201ENST00000580065 1175 ntBASIC15.56■□□□□ 0.08
CDRT1O95170 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.56■□□□□ 0.08
CDRT1O95170 AL023803.3-201ENST00000615559 522 ntBASIC15.56■□□□□ 0.08
CDRT1O95170 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDRT1O95170 CR769767.2-201ENST00000622735 460 ntBASIC15.56■□□□□ 0.08
CDRT1O95170 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.56■□□□□ 0.08
CDRT1O95170 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CDRT1O95170 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDRT1O95170 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDRT1O95170 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
CDRT1O95170 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.56■□□□□ 0.08
CDRT1O95170 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDRT1O95170 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDRT1O95170 AC046185.3-201ENST00000623228 1824 ntBASIC15.56■□□□□ 0.08
CDRT1O95170 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
CDRT1O95170 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDRT1O95170 LYSMD4-203ENST00000378904 2122 ntBASIC15.56■□□□□ 0.08
CDRT1O95170 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDRT1O95170 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.56■□□□□ 0.08
CDRT1O95170 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDRT1O95170 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.56■□□□□ 0.08
CDRT1O95170 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDRT1O95170 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.56■□□□□ 0.08
CDRT1O95170 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.56■□□□□ 0.08
CDRT1O95170 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT1O95170 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.55■□□□□ 0.08
CDRT1O95170 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT1O95170 AL662844.4-201ENST00000606367 2838 ntBASIC15.55■□□□□ 0.08
CDRT1O95170 CYP2T1P-202ENST00000641596 2535 ntBASIC15.55■□□□□ 0.08
CDRT1O95170 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT1O95170 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.55■□□□□ 0.08
CDRT1O95170 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.55■□□□□ 0.08
CDRT1O95170 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT1O95170 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT1O95170 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT1O95170 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT1O95170 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT1O95170 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT1O95170 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT1O95170 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT1O95170 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT1O95170 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT1O95170 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CDRT1O95170 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT1O95170 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.55■□□□□ 0.08
CDRT1O95170 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.55■□□□□ 0.08
CDRT1O95170 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT1O95170 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.55■□□□□ 0.08
CDRT1O95170 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT1O95170 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.55■□□□□ 0.08
CDRT1O95170 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.55■□□□□ 0.08
CDRT1O95170 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.55■□□□□ 0.08
CDRT1O95170 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT1O95170 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.55■□□□□ 0.08
CDRT1O95170 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT1O95170 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT1O95170 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT1O95170 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CDRT1O95170 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT1O95170 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT1O95170 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT1O95170 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDRT1O95170 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT1O95170 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CDRT1O95170 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CDRT1O95170 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT1O95170 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.54■□□□□ 0.08
CDRT1O95170 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.54■□□□□ 0.08
CDRT1O95170 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.54■□□□□ 0.08
CDRT1O95170 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CDRT1O95170 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT1O95170 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT1O95170 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.54■□□□□ 0.08
CDRT1O95170 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT1O95170 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.54■□□□□ 0.08
CDRT1O95170 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
CDRT1O95170 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.54■□□□□ 0.08
CDRT1O95170 TSPY17P-201ENST00000450329 467 ntBASIC15.54■□□□□ 0.08
CDRT1O95170 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.54■□□□□ 0.08
CDRT1O95170 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT1O95170 AL353719.1-201ENST00000566847 864 ntBASIC15.54■□□□□ 0.08
CDRT1O95170 Z99916.2-201ENST00000604037 246 ntBASIC15.54■□□□□ 0.08
CDRT1O95170 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT1O95170 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT1O95170 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.54■□□□□ 0.08
CDRT1O95170 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT1O95170 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT1O95170 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CDRT1O95170 AC078925.2-201ENST00000624013 1973 ntBASIC15.54■□□□□ 0.08
CDRT1O95170 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT1O95170 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT1O95170 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT1O95170 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT1O95170 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT1O95170 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDRT1O95170 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms