Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KLHL41O60662 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KLHL41O60662 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.3■□□□□ 0.36
KLHL41O60662 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KLHL41O60662 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
KLHL41O60662 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.3■□□□□ 0.36
KLHL41O60662 LINC00167-201ENST00000530583 1419 ntBASIC17.3■□□□□ 0.36
KLHL41O60662 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
KLHL41O60662 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
KLHL41O60662 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHL41O60662 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHL41O60662 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHL41O60662 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
KLHL41O60662 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHL41O60662 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHL41O60662 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KLHL41O60662 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHL41O60662 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHL41O60662 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHL41O60662 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.29■□□□□ 0.36
KLHL41O60662 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KLHL41O60662 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.29■□□□□ 0.36
KLHL41O60662 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KLHL41O60662 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHL41O60662 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
KLHL41O60662 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.29■□□□□ 0.36
KLHL41O60662 KRT8P26-201ENST00000534154 1276 ntBASIC17.29■□□□□ 0.36
KLHL41O60662 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.29■□□□□ 0.36
KLHL41O60662 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.29■□□□□ 0.36
KLHL41O60662 MIR3917-201ENST00000580971 93 ntBASIC17.29■□□□□ 0.36
KLHL41O60662 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KLHL41O60662 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.29■□□□□ 0.36
KLHL41O60662 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHL41O60662 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KLHL41O60662 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHL41O60662 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
KLHL41O60662 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHL41O60662 AC105020.1-201ENST00000435356 2205 ntBASIC17.29■□□□□ 0.36
KLHL41O60662 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.29■□□□□ 0.36
KLHL41O60662 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHL41O60662 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHL41O60662 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
KLHL41O60662 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
KLHL41O60662 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHL41O60662 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHL41O60662 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KLHL41O60662 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHL41O60662 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
KLHL41O60662 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.29■□□□□ 0.36
KLHL41O60662 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHL41O60662 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL41O60662 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL41O60662 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL41O60662 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL41O60662 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.28■□□□□ 0.36
KLHL41O60662 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL41O60662 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL41O60662 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL41O60662 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
KLHL41O60662 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
KLHL41O60662 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL41O60662 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.28■□□□□ 0.36
KLHL41O60662 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL41O60662 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL41O60662 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
KLHL41O60662 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL41O60662 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL41O60662 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL41O60662 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL41O60662 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.28■□□□□ 0.36
KLHL41O60662 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL41O60662 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.28■□□□□ 0.36
KLHL41O60662 LINC01451-201ENST00000623792 534 ntBASIC17.28■□□□□ 0.36
KLHL41O60662 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL41O60662 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL41O60662 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL41O60662 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL41O60662 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.28■□□□□ 0.36
KLHL41O60662 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL41O60662 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL41O60662 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL41O60662 AC060834.1-201ENST00000443027 2032 ntBASIC17.28■□□□□ 0.36
KLHL41O60662 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.28■□□□□ 0.36
KLHL41O60662 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KLHL41O60662 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.27■□□□□ 0.36
KLHL41O60662 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KLHL41O60662 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.27■□□□□ 0.36
KLHL41O60662 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
KLHL41O60662 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
KLHL41O60662 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
KLHL41O60662 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
KLHL41O60662 PCDH8P1-201ENST00000428983 2773 ntBASIC17.27■□□□□ 0.36
KLHL41O60662 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KLHL41O60662 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
KLHL41O60662 AC026396.1-201ENST00000419388 421 ntBASIC17.27■□□□□ 0.36
KLHL41O60662 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.27■□□□□ 0.36
KLHL41O60662 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
KLHL41O60662 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.27■□□□□ 0.36
KLHL41O60662 AC111152.3-201ENST00000569699 673 ntBASIC17.27■□□□□ 0.36
KLHL41O60662 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms