Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.67■□□□□ 0.26
PRICKLE3O43900 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.67■□□□□ 0.26
PRICKLE3O43900 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.67■□□□□ 0.26
PRICKLE3O43900 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.67■□□□□ 0.26
PRICKLE3O43900 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.67■□□□□ 0.26
PRICKLE3O43900 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.67■□□□□ 0.26
PRICKLE3O43900 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.67■□□□□ 0.26
PRICKLE3O43900 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.67■□□□□ 0.26
PRICKLE3O43900 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.67■□□□□ 0.26
PRICKLE3O43900 AC006557.2-201ENST00000592985 1240 ntBASIC16.67■□□□□ 0.26
PRICKLE3O43900 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.67■□□□□ 0.26
PRICKLE3O43900 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRICKLE3O43900 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PRICKLE3O43900 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRICKLE3O43900 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.67■□□□□ 0.26
PRICKLE3O43900 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.67■□□□□ 0.26
PRICKLE3O43900 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRICKLE3O43900 AL590787.1-201ENST00000568856 1315 ntBASIC16.67■□□□□ 0.26
PRICKLE3O43900 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.67■□□□□ 0.26
PRICKLE3O43900 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRICKLE3O43900 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRICKLE3O43900 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRICKLE3O43900 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PRICKLE3O43900 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.66■□□□□ 0.26
PRICKLE3O43900 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PRICKLE3O43900 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRICKLE3O43900 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRICKLE3O43900 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRICKLE3O43900 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PRICKLE3O43900 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRICKLE3O43900 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRICKLE3O43900 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRICKLE3O43900 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.66■□□□□ 0.26
PRICKLE3O43900 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRICKLE3O43900 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.66■□□□□ 0.26
PRICKLE3O43900 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PRICKLE3O43900 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.66■□□□□ 0.26
PRICKLE3O43900 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.66■□□□□ 0.26
PRICKLE3O43900 AC105339.3-201ENST00000560043 636 ntBASIC16.66■□□□□ 0.26
PRICKLE3O43900 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.66■□□□□ 0.26
PRICKLE3O43900 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.66■□□□□ 0.26
PRICKLE3O43900 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.66■□□□□ 0.26
PRICKLE3O43900 AC116407.3-201ENST00000623905 1129 ntBASIC16.66■□□□□ 0.26
PRICKLE3O43900 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRICKLE3O43900 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRICKLE3O43900 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PRICKLE3O43900 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRICKLE3O43900 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PRICKLE3O43900 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRICKLE3O43900 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRICKLE3O43900 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRICKLE3O43900 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRICKLE3O43900 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.66■□□□□ 0.26
PRICKLE3O43900 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRICKLE3O43900 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRICKLE3O43900 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PRICKLE3O43900 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.66■□□□□ 0.26
PRICKLE3O43900 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRICKLE3O43900 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.65■□□□□ 0.26
PRICKLE3O43900 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRICKLE3O43900 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRICKLE3O43900 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.65■□□□□ 0.26
PRICKLE3O43900 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRICKLE3O43900 AC243591.1-201ENST00000452967 1364 ntBASIC16.65■□□□□ 0.26
PRICKLE3O43900 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRICKLE3O43900 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PRICKLE3O43900 AC006504.4-201ENST00000592118 1568 ntBASIC16.65■□□□□ 0.26
PRICKLE3O43900 AC141586.5-201ENST00000624546 2050 ntBASIC16.65■□□□□ 0.26
PRICKLE3O43900 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PRICKLE3O43900 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRICKLE3O43900 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRICKLE3O43900 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRICKLE3O43900 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRICKLE3O43900 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.65■□□□□ 0.26
PRICKLE3O43900 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRICKLE3O43900 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PRICKLE3O43900 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PRICKLE3O43900 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.65■□□□□ 0.26
PRICKLE3O43900 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.65■□□□□ 0.26
PRICKLE3O43900 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.65■□□□□ 0.26
PRICKLE3O43900 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRICKLE3O43900 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRICKLE3O43900 GPR89P-201ENST00000407924 1495 ntBASIC16.65■□□□□ 0.26
PRICKLE3O43900 AP002414.3-201ENST00000589352 1468 ntBASIC16.65■□□□□ 0.26
PRICKLE3O43900 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRICKLE3O43900 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.65■□□□□ 0.26
PRICKLE3O43900 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRICKLE3O43900 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PRICKLE3O43900 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.65■□□□□ 0.26
PRICKLE3O43900 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRICKLE3O43900 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PRICKLE3O43900 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PRICKLE3O43900 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
PRICKLE3O43900 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRICKLE3O43900 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms