Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 PCED1CP-201ENST00000419887 785 ntBASIC17.58■□□□□ 0.4
AP3B1O00203 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
AP3B1O00203 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.58■□□□□ 0.4
AP3B1O00203 AC087388.1-201ENST00000571370 1112 ntBASIC17.58■□□□□ 0.4
AP3B1O00203 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP3B1O00203 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP3B1O00203 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
AP3B1O00203 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
AP3B1O00203 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AP3B1O00203 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP3B1O00203 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP3B1O00203 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
AP3B1O00203 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
AP3B1O00203 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP3B1O00203 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3B1O00203 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP3B1O00203 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3B1O00203 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3B1O00203 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.57■□□□□ 0.4
AP3B1O00203 TP73-AS1-210ENST00000637775 1455 ntBASIC17.57■□□□□ 0.4
AP3B1O00203 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.57■□□□□ 0.4
AP3B1O00203 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
AP3B1O00203 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
AP3B1O00203 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3B1O00203 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP3B1O00203 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP3B1O00203 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3B1O00203 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.57■□□□□ 0.4
AP3B1O00203 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.57■□□□□ 0.4
AP3B1O00203 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3B1O00203 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.57■□□□□ 0.4
AP3B1O00203 MINOS1P3-201ENST00000457048 203 ntBASIC17.57■□□□□ 0.4
AP3B1O00203 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.57■□□□□ 0.4
AP3B1O00203 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
AP3B1O00203 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.57■□□□□ 0.4
AP3B1O00203 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
AP3B1O00203 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.57■□□□□ 0.4
AP3B1O00203 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3B1O00203 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.57■□□□□ 0.4
AP3B1O00203 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3B1O00203 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
AP3B1O00203 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3B1O00203 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3B1O00203 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3B1O00203 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3B1O00203 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3B1O00203 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3B1O00203 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3B1O00203 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.57■□□□□ 0.4
AP3B1O00203 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.57■□□□□ 0.4
AP3B1O00203 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.57■□□□□ 0.4
AP3B1O00203 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
AP3B1O00203 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3B1O00203 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
AP3B1O00203 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.56■□□□□ 0.4
AP3B1O00203 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.56■□□□□ 0.4
AP3B1O00203 IER3-202ENST00000376377 1350 ntBASIC17.56■□□□□ 0.4
AP3B1O00203 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3B1O00203 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3B1O00203 AC080080.1-201ENST00000625121 2420 ntBASIC17.56■□□□□ 0.4
AP3B1O00203 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.56■□□□□ 0.4
AP3B1O00203 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3B1O00203 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3B1O00203 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
AP3B1O00203 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3B1O00203 KLF4P1-201ENST00000412782 1185 ntBASIC17.56■□□□□ 0.4
AP3B1O00203 POM121L3P-201ENST00000419331 1163 ntBASIC17.56■□□□□ 0.4
AP3B1O00203 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.56■□□□□ 0.4
AP3B1O00203 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
AP3B1O00203 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.56■□□□□ 0.4
AP3B1O00203 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3B1O00203 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
AP3B1O00203 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
AP3B1O00203 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3B1O00203 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3B1O00203 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.56■□□□□ 0.4
AP3B1O00203 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3B1O00203 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP3B1O00203 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP3B1O00203 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
AP3B1O00203 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3B1O00203 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3B1O00203 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.56■□□□□ 0.4
AP3B1O00203 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3B1O00203 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3B1O00203 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP3B1O00203 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3B1O00203 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.56■□□□□ 0.4
AP3B1O00203 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3B1O00203 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3B1O00203 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP3B1O00203 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
AP3B1O00203 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.55■□□□□ 0.4
AP3B1O00203 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3B1O00203 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
AP3B1O00203 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.55■□□□□ 0.4
AP3B1O00203 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3B1O00203 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
AP3B1O00203 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP3B1O00203 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms