Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
TMEM235A6NFC5 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.89□□□□□ -0.03
TMEM235A6NFC5 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEM235A6NFC5 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM235A6NFC5 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEM235A6NFC5 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM235A6NFC5 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.89□□□□□ -0.03
TMEM235A6NFC5 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TMEM235A6NFC5 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.89□□□□□ -0.03
TMEM235A6NFC5 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM235A6NFC5 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM235A6NFC5 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM235A6NFC5 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEM235A6NFC5 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TMEM235A6NFC5 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM235A6NFC5 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM235A6NFC5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM235A6NFC5 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 AC078925.2-201ENST00000624013 1973 ntBASIC14.88□□□□□ -0.03
TMEM235A6NFC5 TSPY14P-201ENST00000303979 915 ntBASIC14.88□□□□□ -0.03
TMEM235A6NFC5 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM235A6NFC5 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 AC093525.9-201ENST00000624961 1746 ntBASIC14.87□□□□□ -0.03
TMEM235A6NFC5 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 NEK4P2-201ENST00000580004 1012 ntBASIC14.87□□□□□ -0.03
TMEM235A6NFC5 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM235A6NFC5 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms