Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRDV1A0A1B0GX56 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.32■□□□□ 0.04
TRDV1A0A1B0GX56 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRDV1A0A1B0GX56 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRDV1A0A1B0GX56 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.32■□□□□ 0.04
TRDV1A0A1B0GX56 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRDV1A0A1B0GX56 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRDV1A0A1B0GX56 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.32■□□□□ 0.04
TRDV1A0A1B0GX56 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.32■□□□□ 0.04
TRDV1A0A1B0GX56 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRDV1A0A1B0GX56 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRDV1A0A1B0GX56 AC079328.2-201ENST00000561241 3354 ntBASIC15.32■□□□□ 0.04
TRDV1A0A1B0GX56 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 AC112698.1-201ENST00000510299 916 ntBASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 KRT89P-201ENST00000620027 1478 ntBASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.31■□□□□ 0.04
TRDV1A0A1B0GX56 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 AC007663.1-201ENST00000438948 1240 ntBASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 AC009154.2-201ENST00000621177 724 ntBASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 AC132872.4-202ENST00000622924 2756 ntBASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRDV1A0A1B0GX56 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 LINC00554-201ENST00000564841 3011 ntBASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms