Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.47
UBE2D4Q9Y2X8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
UBE2D4Q9Y2X8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
UBE2D4Q9Y2X8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 MIR718-201ENST00000390190 70 ntBASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 SLC25A1P3-201ENST00000395415 828 ntBASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 USP36-216ENST00000589424 970 ntTSL 5 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 AC004263.2-201ENST00000617183 678 ntBASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC12.14□□□□□ -0.47
UBE2D4Q9Y2X8 AL391005.1-201ENST00000623953 2435 ntBASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 FAM87A-204ENST00000613235 858 ntBASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC12.13□□□□□ -0.47
UBE2D4Q9Y2X8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms