Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 AC005332.8-201ENST00000622750 2735 ntBASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 MRPL20P1-201ENST00000400819 433 ntBASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 HNRNPA1P28-201ENST00000424481 961 ntBASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 AC002347.1-201ENST00000569543 541 ntBASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 AC010654.1-201ENST00000615722 808 ntBASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 NOC2LP2-201ENST00000407594 1944 ntBASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DENND2AQ9ULE3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
DENND2AQ9ULE3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
DENND2AQ9ULE3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
DENND2AQ9ULE3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
DENND2AQ9ULE3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DENND2AQ9ULE3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC21.02■□□□□ 0.96
DENND2AQ9ULE3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC21.02■□□□□ 0.96
DENND2AQ9ULE3 AC023274.1-201ENST00000418278 595 ntBASIC21.02■□□□□ 0.96
DENND2AQ9ULE3 UPF3AP3-201ENST00000420996 769 ntBASIC21.02■□□□□ 0.96
DENND2AQ9ULE3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC21.02■□□□□ 0.96
DENND2AQ9ULE3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DENND2AQ9ULE3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21.02■□□□□ 0.96
DENND2AQ9ULE3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
DENND2AQ9ULE3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
DENND2AQ9ULE3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
DENND2AQ9ULE3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
DENND2AQ9ULE3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
DENND2AQ9ULE3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DENND2AQ9ULE3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.02■□□□□ 0.96
DENND2AQ9ULE3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DENND2AQ9ULE3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.02■□□□□ 0.96
DENND2AQ9ULE3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
DENND2AQ9ULE3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
DENND2AQ9ULE3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.01■□□□□ 0.95
DENND2AQ9ULE3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
DENND2AQ9ULE3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
DENND2AQ9ULE3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
DENND2AQ9ULE3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DENND2AQ9ULE3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DENND2AQ9ULE3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DENND2AQ9ULE3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC21.01■□□□□ 0.95
DENND2AQ9ULE3 ATP6V0CP3-201ENST00000417255 467 ntBASIC21.01■□□□□ 0.95
DENND2AQ9ULE3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC21.01■□□□□ 0.95
DENND2AQ9ULE3 DNAJB3-201ENST00000446806 729 ntBASIC21.01■□□□□ 0.95
DENND2AQ9ULE3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.01■□□□□ 0.95
DENND2AQ9ULE3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC21.01■□□□□ 0.95
DENND2AQ9ULE3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC21.01■□□□□ 0.95
DENND2AQ9ULE3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DENND2AQ9ULE3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DENND2AQ9ULE3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
DENND2AQ9ULE3 AC134043.2-201ENST00000624206 2238 ntBASIC21.01■□□□□ 0.95
DENND2AQ9ULE3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
DENND2AQ9ULE3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
DENND2AQ9ULE3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21■□□□□ 0.95
DENND2AQ9ULE3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DENND2AQ9ULE3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21■□□□□ 0.95
DENND2AQ9ULE3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC21■□□□□ 0.95
DENND2AQ9ULE3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
DENND2AQ9ULE3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
DENND2AQ9ULE3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
DENND2AQ9ULE3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
DENND2AQ9ULE3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21■□□□□ 0.95
DENND2AQ9ULE3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
DENND2AQ9ULE3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DENND2AQ9ULE3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DENND2AQ9ULE3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DENND2AQ9ULE3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
DENND2AQ9ULE3 RPSAP43-201ENST00000402237 625 ntBASIC21■□□□□ 0.95
DENND2AQ9ULE3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC21■□□□□ 0.95
DENND2AQ9ULE3 GPX1P2-201ENST00000429271 606 ntBASIC21■□□□□ 0.95
DENND2AQ9ULE3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC21■□□□□ 0.95
DENND2AQ9ULE3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC21■□□□□ 0.95
DENND2AQ9ULE3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21■□□□□ 0.95
DENND2AQ9ULE3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DENND2AQ9ULE3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DENND2AQ9ULE3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DENND2AQ9ULE3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
DENND2AQ9ULE3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21■□□□□ 0.95
DENND2AQ9ULE3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DENND2AQ9ULE3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DENND2AQ9ULE3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DENND2AQ9ULE3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DENND2AQ9ULE3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
DENND2AQ9ULE3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms