Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
FBXO28Q9NVF7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
FBXO28Q9NVF7 FAM58CP-201ENST00000435741 640 ntBASIC19.92■□□□□ 0.78
FBXO28Q9NVF7 FAM185BP-201ENST00000443595 716 ntBASIC19.92■□□□□ 0.78
FBXO28Q9NVF7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.92■□□□□ 0.78
FBXO28Q9NVF7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FBXO28Q9NVF7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.92■□□□□ 0.78
FBXO28Q9NVF7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.92■□□□□ 0.78
FBXO28Q9NVF7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.92■□□□□ 0.78
FBXO28Q9NVF7 SNHG9-202ENST00000564014 471 ntBASIC19.92■□□□□ 0.78
FBXO28Q9NVF7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
FBXO28Q9NVF7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FBXO28Q9NVF7 KRT18P28-201ENST00000453838 1332 ntBASIC19.92■□□□□ 0.78
FBXO28Q9NVF7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FBXO28Q9NVF7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FBXO28Q9NVF7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
FBXO28Q9NVF7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
FBXO28Q9NVF7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.92■□□□□ 0.78
FBXO28Q9NVF7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.92■□□□□ 0.78
FBXO28Q9NVF7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FBXO28Q9NVF7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
FBXO28Q9NVF7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
FBXO28Q9NVF7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 HMGN1P19-201ENST00000436976 333 ntBASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 METTL21AP1-201ENST00000438852 635 ntBASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 AC087163.2-201ENST00000457299 853 ntBASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 AL355385.1-201ENST00000606123 409 ntBASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 AC091812.2-201ENST00000619081 385 ntBASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 AC092919.2-201ENST00000623631 1645 ntBASIC19.91■□□□□ 0.78
FBXO28Q9NVF7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 AC254562.1-201ENST00000417586 456 ntBASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 CNN2P11-201ENST00000429351 262 ntBASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
FBXO28Q9NVF7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
FBXO28Q9NVF7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
FBXO28Q9NVF7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FBXO28Q9NVF7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FBXO28Q9NVF7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FBXO28Q9NVF7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FBXO28Q9NVF7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FBXO28Q9NVF7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FBXO28Q9NVF7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.89■□□□□ 0.77
FBXO28Q9NVF7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FBXO28Q9NVF7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
FBXO28Q9NVF7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
FBXO28Q9NVF7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.89■□□□□ 0.77
FBXO28Q9NVF7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.89■□□□□ 0.77
FBXO28Q9NVF7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.89■□□□□ 0.77
FBXO28Q9NVF7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms