Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 AC025580.3-201ENST00000617932 1424 ntBASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 AC009336.1-201ENST00000608941 1553 ntBASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 AL355312.1-201ENST00000407115 2176 ntBASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 AC109322.1-201ENST00000524499 1264 ntBASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 OR7E47P-204ENST00000575924 449 ntBASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 AC105339.1-204ENST00000636249 355 ntBASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 AC092902.6-201ENST00000641783 218 ntBASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDLIM7Q9NR12 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDLIM7Q9NR12 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.37■□□□□ 0.69
PDLIM7Q9NR12 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDLIM7Q9NR12 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.37■□□□□ 0.69
PDLIM7Q9NR12 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PDLIM7Q9NR12 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PDLIM7Q9NR12 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.37■□□□□ 0.69
PDLIM7Q9NR12 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDLIM7Q9NR12 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PDLIM7Q9NR12 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.37■□□□□ 0.69
PDLIM7Q9NR12 KLF4P1-201ENST00000412782 1185 ntBASIC19.37■□□□□ 0.69
PDLIM7Q9NR12 STK19B-204ENST00000512515 211 ntBASIC19.37■□□□□ 0.69
PDLIM7Q9NR12 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.37■□□□□ 0.69
PDLIM7Q9NR12 AC025678.2-201ENST00000562061 970 ntBASIC19.37■□□□□ 0.69
PDLIM7Q9NR12 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.37■□□□□ 0.69
PDLIM7Q9NR12 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDLIM7Q9NR12 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDLIM7Q9NR12 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDLIM7Q9NR12 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDLIM7Q9NR12 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.37■□□□□ 0.69
PDLIM7Q9NR12 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PDLIM7Q9NR12 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 AC133963.1-201ENST00000504166 1679 ntBASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.36■□□□□ 0.69
PDLIM7Q9NR12 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms