Protein–RNA interactions for Protein: Q9NQX3

GPHN, Gephyrin, humanhuman

Predicted RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPHNQ9NQX3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 SART3-203ENST00000546611 1184 ntBASIC20.48■□□□□ 0.87
GPHNQ9NQX3 NKAPP1-205ENST00000585790 367 ntBASIC20.48■□□□□ 0.87
GPHNQ9NQX3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.48■□□□□ 0.87
GPHNQ9NQX3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 AC079776.2-201ENST00000641154 1609 ntBASIC20.47■□□□□ 0.87
GPHNQ9NQX3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 MRPL3P1-201ENST00000400109 1033 ntBASIC20.47■□□□□ 0.87
GPHNQ9NQX3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 AL355877.3-201ENST00000622820 899 ntBASIC20.47■□□□□ 0.87
GPHNQ9NQX3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.47■□□□□ 0.87
GPHNQ9NQX3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 AP001094.4-201ENST00000579008 2176 ntBASIC20.46■□□□□ 0.87
GPHNQ9NQX3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 AL023806.1-201ENST00000603994 1649 ntBASIC20.46■□□□□ 0.87
GPHNQ9NQX3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 AC003669.1-201ENST00000334569 611 ntBASIC20.46■□□□□ 0.87
GPHNQ9NQX3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 MYCLP1-201ENST00000372451 1075 ntBASIC20.46■□□□□ 0.87
GPHNQ9NQX3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 AC008608.2-201ENST00000606089 416 ntBASIC20.46■□□□□ 0.87
GPHNQ9NQX3 TP73-AS1-207ENST00000624167 988 ntBASIC20.46■□□□□ 0.87
GPHNQ9NQX3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GPHNQ9NQX3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms