Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 NSUN5P1-202ENST00000421140 1535 ntBASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 NSUN5P2-203ENST00000457352 1529 ntBASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 AC091076.1-201ENST00000610741 619 ntBASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC40Q9H9A6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LRRC40Q9H9A6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 IGHV3-47-201ENST00000425060 335 ntBASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LRRC40Q9H9A6 AC096582.2-201ENST00000510860 516 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms