Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
HIPK3Q9H422 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIPK3Q9H422 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.93■□□□□ 0.62
HIPK3Q9H422 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.93■□□□□ 0.62
HIPK3Q9H422 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIPK3Q9H422 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK3Q9H422 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK3Q9H422 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK3Q9H422 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK3Q9H422 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK3Q9H422 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK3Q9H422 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK3Q9H422 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HIPK3Q9H422 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK3Q9H422 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK3Q9H422 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK3Q9H422 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK3Q9H422 AC140658.5-201ENST00000438532 169 ntBASIC18.92■□□□□ 0.62
HIPK3Q9H422 SLC25A6P2-201ENST00000497974 877 ntBASIC18.92■□□□□ 0.62
HIPK3Q9H422 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.92■□□□□ 0.62
HIPK3Q9H422 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.92■□□□□ 0.62
HIPK3Q9H422 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.92■□□□□ 0.62
HIPK3Q9H422 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK3Q9H422 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK3Q9H422 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK3Q9H422 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.92■□□□□ 0.62
HIPK3Q9H422 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.92■□□□□ 0.62
HIPK3Q9H422 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HIPK3Q9H422 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK3Q9H422 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK3Q9H422 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK3Q9H422 CROCCP3-202ENST00000420820 1947 ntBASIC18.92■□□□□ 0.62
HIPK3Q9H422 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK3Q9H422 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.92■□□□□ 0.62
HIPK3Q9H422 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK3Q9H422 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK3Q9H422 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIPK3Q9H422 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HIPK3Q9H422 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HIPK3Q9H422 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIPK3Q9H422 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.91■□□□□ 0.62
HIPK3Q9H422 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIPK3Q9H422 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.91■□□□□ 0.62
HIPK3Q9H422 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.91■□□□□ 0.62
HIPK3Q9H422 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.91■□□□□ 0.62
HIPK3Q9H422 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
HIPK3Q9H422 KRT18P32-201ENST00000424695 1287 ntBASIC18.91■□□□□ 0.62
HIPK3Q9H422 AC055876.3-201ENST00000431496 288 ntBASIC18.91■□□□□ 0.62
HIPK3Q9H422 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.91■□□□□ 0.62
HIPK3Q9H422 AC087163.2-201ENST00000457299 853 ntBASIC18.91■□□□□ 0.62
HIPK3Q9H422 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HIPK3Q9H422 RN7SL589P-201ENST00000481268 310 ntBASIC18.91■□□□□ 0.62
HIPK3Q9H422 AC069335.1-201ENST00000489972 472 ntBASIC18.91■□□□□ 0.62
HIPK3Q9H422 AC079140.1-201ENST00000508039 487 ntBASIC18.91■□□□□ 0.62
HIPK3Q9H422 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.91■□□□□ 0.62
HIPK3Q9H422 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.91■□□□□ 0.62
HIPK3Q9H422 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.91■□□□□ 0.62
HIPK3Q9H422 AC051619.7-201ENST00000568314 623 ntBASIC18.91■□□□□ 0.62
HIPK3Q9H422 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HIPK3Q9H422 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIPK3Q9H422 AC138649.4-201ENST00000612222 287 ntBASIC18.91■□□□□ 0.62
HIPK3Q9H422 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HIPK3Q9H422 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.91■□□□□ 0.62
HIPK3Q9H422 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIPK3Q9H422 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIPK3Q9H422 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.91■□□□□ 0.62
HIPK3Q9H422 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HIPK3Q9H422 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HIPK3Q9H422 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HIPK3Q9H422 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HIPK3Q9H422 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIPK3Q9H422 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.9■□□□□ 0.62
HIPK3Q9H422 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK3Q9H422 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK3Q9H422 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.9■□□□□ 0.62
HIPK3Q9H422 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.9■□□□□ 0.62
HIPK3Q9H422 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK3Q9H422 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.9■□□□□ 0.62
HIPK3Q9H422 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.9■□□□□ 0.62
HIPK3Q9H422 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK3Q9H422 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.9■□□□□ 0.62
HIPK3Q9H422 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.9■□□□□ 0.62
HIPK3Q9H422 TERF1P3-201ENST00000505638 1227 ntBASIC18.9■□□□□ 0.62
HIPK3Q9H422 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK3Q9H422 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.9■□□□□ 0.62
HIPK3Q9H422 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.9■□□□□ 0.62
HIPK3Q9H422 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK3Q9H422 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
HIPK3Q9H422 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK3Q9H422 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.9■□□□□ 0.62
HIPK3Q9H422 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.9■□□□□ 0.62
HIPK3Q9H422 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK3Q9H422 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
HIPK3Q9H422 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.9■□□□□ 0.62
HIPK3Q9H422 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK3Q9H422 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK3Q9H422 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK3Q9H422 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK3Q9H422 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK3Q9H422 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms