Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 AL732292.2-201ENST00000609649 430 ntBASIC15.55■□□□□ 0.08
NELFAQ9H3P2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.55■□□□□ 0.08
NELFAQ9H3P2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.55■□□□□ 0.08
NELFAQ9H3P2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.55■□□□□ 0.08
NELFAQ9H3P2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.55■□□□□ 0.08
NELFAQ9H3P2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.55■□□□□ 0.08
NELFAQ9H3P2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NELFAQ9H3P2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NELFAQ9H3P2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NELFAQ9H3P2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.55■□□□□ 0.08
NELFAQ9H3P2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
NELFAQ9H3P2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
NELFAQ9H3P2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
NELFAQ9H3P2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NELFAQ9H3P2 INTS4P1-201ENST00000438455 1935 ntBASIC15.55■□□□□ 0.08
NELFAQ9H3P2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 AC002558.1-201ENST00000488906 803 ntBASIC15.54■□□□□ 0.08
NELFAQ9H3P2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.54■□□□□ 0.08
NELFAQ9H3P2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.54■□□□□ 0.08
NELFAQ9H3P2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 KRT18P31-201ENST00000506277 1292 ntBASIC15.53■□□□□ 0.08
NELFAQ9H3P2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 PP12613-201ENST00000424958 2230 ntBASIC15.53■□□□□ 0.08
NELFAQ9H3P2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NELFAQ9H3P2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NELFAQ9H3P2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NELFAQ9H3P2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NELFAQ9H3P2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NELFAQ9H3P2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NELFAQ9H3P2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NELFAQ9H3P2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NELFAQ9H3P2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NELFAQ9H3P2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
NELFAQ9H3P2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.52■□□□□ 0.08
NELFAQ9H3P2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NELFAQ9H3P2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms