Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 PMS2P2-201ENST00000425039 1128 ntBASIC18.12■□□□□ 0.49
LRRC3Q9BY71 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 AC079781.4-201ENST00000641908 219 ntBASIC18.12■□□□□ 0.49
LRRC3Q9BY71 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 AL135999.2-201ENST00000622438 1686 ntBASIC18.12■□□□□ 0.49
LRRC3Q9BY71 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.11■□□□□ 0.49
LRRC3Q9BY71 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 MIR4469-201ENST00000583919 79 ntBASIC18.11■□□□□ 0.49
LRRC3Q9BY71 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 AC004877.2-201ENST00000623941 599 ntBASIC18.11■□□□□ 0.49
LRRC3Q9BY71 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 AL133373.2-201ENST00000623187 2828 ntBASIC18.11■□□□□ 0.49
LRRC3Q9BY71 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LRRC3Q9BY71 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 NOC2LP2-201ENST00000407594 1944 ntBASIC18.1■□□□□ 0.49
LRRC3Q9BY71 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 HTR5BP-201ENST00000430851 1154 ntBASIC18.1■□□□□ 0.49
LRRC3Q9BY71 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 KRT19P2-202ENST00000557173 1012 ntBASIC18.1■□□□□ 0.49
LRRC3Q9BY71 PDPK2P-202ENST00000562415 1191 ntBASIC18.1■□□□□ 0.49
LRRC3Q9BY71 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC3Q9BY71 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 AC046185.3-201ENST00000623228 1824 ntBASIC18.09■□□□□ 0.49
LRRC3Q9BY71 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms