Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.76■□□□□ 0.43
NOTCH4Q99466 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
NOTCH4Q99466 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NOTCH4Q99466 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NOTCH4Q99466 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NOTCH4Q99466 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
NOTCH4Q99466 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NOTCH4Q99466 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NOTCH4Q99466 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NOTCH4Q99466 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NOTCH4Q99466 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NOTCH4Q99466 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.75■□□□□ 0.43
NOTCH4Q99466 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.75■□□□□ 0.43
NOTCH4Q99466 AL592309.1-201ENST00000443127 649 ntBASIC17.75■□□□□ 0.43
NOTCH4Q99466 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.75■□□□□ 0.43
NOTCH4Q99466 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.75■□□□□ 0.43
NOTCH4Q99466 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.75■□□□□ 0.43
NOTCH4Q99466 MIR4515-201ENST00000584082 81 ntBASIC17.75■□□□□ 0.43
NOTCH4Q99466 AL645728.2-201ENST00000641974 660 ntBASIC17.75■□□□□ 0.43
NOTCH4Q99466 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
NOTCH4Q99466 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
NOTCH4Q99466 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NOTCH4Q99466 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.75■□□□□ 0.43
NOTCH4Q99466 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NOTCH4Q99466 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.75■□□□□ 0.43
NOTCH4Q99466 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.75■□□□□ 0.43
NOTCH4Q99466 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.75■□□□□ 0.43
NOTCH4Q99466 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
NOTCH4Q99466 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
NOTCH4Q99466 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.74■□□□□ 0.43
NOTCH4Q99466 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.74■□□□□ 0.43
NOTCH4Q99466 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.74■□□□□ 0.43
NOTCH4Q99466 MIR661-201ENST00000384842 89 ntBASIC17.74■□□□□ 0.43
NOTCH4Q99466 AC002056.1-201ENST00000395613 760 ntBASIC17.74■□□□□ 0.43
NOTCH4Q99466 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.74■□□□□ 0.43
NOTCH4Q99466 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NOTCH4Q99466 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.74■□□□□ 0.43
NOTCH4Q99466 RARRES2P8-201ENST00000566335 367 ntBASIC17.74■□□□□ 0.43
NOTCH4Q99466 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.74■□□□□ 0.43
NOTCH4Q99466 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NOTCH4Q99466 AL354751.1-201ENST00000412768 1863 ntBASIC17.74■□□□□ 0.43
NOTCH4Q99466 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOTCH4Q99466 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NOTCH4Q99466 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOTCH4Q99466 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NOTCH4Q99466 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOTCH4Q99466 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOTCH4Q99466 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOTCH4Q99466 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.74■□□□□ 0.43
NOTCH4Q99466 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOTCH4Q99466 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
NOTCH4Q99466 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOTCH4Q99466 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.74■□□□□ 0.43
NOTCH4Q99466 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOTCH4Q99466 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NOTCH4Q99466 AC069262.1-201ENST00000539058 672 ntBASIC17.74■□□□□ 0.43
NOTCH4Q99466 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.74■□□□□ 0.43
NOTCH4Q99466 AC138761.1-201ENST00000584393 385 ntBASIC17.74■□□□□ 0.43
NOTCH4Q99466 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.74■□□□□ 0.43
NOTCH4Q99466 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOTCH4Q99466 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
NOTCH4Q99466 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOTCH4Q99466 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NOTCH4Q99466 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.73■□□□□ 0.43
NOTCH4Q99466 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NOTCH4Q99466 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NOTCH4Q99466 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NOTCH4Q99466 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NOTCH4Q99466 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
NOTCH4Q99466 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NOTCH4Q99466 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.73■□□□□ 0.43
NOTCH4Q99466 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NOTCH4Q99466 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
NOTCH4Q99466 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.73■□□□□ 0.43
NOTCH4Q99466 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
NOTCH4Q99466 AC067863.1-201ENST00000494933 530 ntBASIC17.73■□□□□ 0.43
NOTCH4Q99466 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.73■□□□□ 0.43
NOTCH4Q99466 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.73■□□□□ 0.43
NOTCH4Q99466 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.73■□□□□ 0.43
NOTCH4Q99466 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
NOTCH4Q99466 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NOTCH4Q99466 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NOTCH4Q99466 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NOTCH4Q99466 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
NOTCH4Q99466 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NOTCH4Q99466 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.73■□□□□ 0.43
NOTCH4Q99466 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NOTCH4Q99466 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NOTCH4Q99466 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NOTCH4Q99466 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.73■□□□□ 0.43
NOTCH4Q99466 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NOTCH4Q99466 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NOTCH4Q99466 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NOTCH4Q99466 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.73■□□□□ 0.43
NOTCH4Q99466 AC012317.2-201ENST00000623305 2251 ntBASIC17.72■□□□□ 0.43
NOTCH4Q99466 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NOTCH4Q99466 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.72■□□□□ 0.43
NOTCH4Q99466 AC079140.1-201ENST00000508039 487 ntBASIC17.72■□□□□ 0.43
NOTCH4Q99466 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.72■□□□□ 0.43
NOTCH4Q99466 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms