Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.57■■□□□ 1.04
CCDC85AQ96PX6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CCDC85AQ96PX6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.57■■□□□ 1.04
CCDC85AQ96PX6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC85AQ96PX6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC85AQ96PX6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC85AQ96PX6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC85AQ96PX6 AL590787.1-201ENST00000568856 1315 ntBASIC21.56■■□□□ 1.04
CCDC85AQ96PX6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC85AQ96PX6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC85AQ96PX6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC85AQ96PX6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.56■■□□□ 1.04
CCDC85AQ96PX6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC85AQ96PX6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC85AQ96PX6 AC211486.1-202ENST00000416371 468 ntBASIC21.56■■□□□ 1.04
CCDC85AQ96PX6 MCCD1P2-201ENST00000423228 335 ntBASIC21.56■■□□□ 1.04
CCDC85AQ96PX6 AC211476.1-201ENST00000503899 468 ntBASIC21.56■■□□□ 1.04
CCDC85AQ96PX6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
CCDC85AQ96PX6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC85AQ96PX6 AC010654.1-201ENST00000615722 808 ntBASIC21.56■■□□□ 1.04
CCDC85AQ96PX6 AC004877.2-201ENST00000623941 599 ntBASIC21.56■■□□□ 1.04
CCDC85AQ96PX6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC85AQ96PX6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC85AQ96PX6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC85AQ96PX6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.56■■□□□ 1.04
CCDC85AQ96PX6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.56■■□□□ 1.04
CCDC85AQ96PX6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC85AQ96PX6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 CD82-202ENST00000342935 967 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 AP002414.1-201ENST00000391405 1147 ntBASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 MIR4469-201ENST00000583919 79 ntBASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 AC002310.6-201ENST00000624451 1377 ntBASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 FZD10-202ENST00000539839 3282 ntBASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 BCAR1-209ENST00000546196 1340 ntBASIC21.55■■□□□ 1.04
CCDC85AQ96PX6 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CCDC85AQ96PX6 AL355312.1-201ENST00000407115 2176 ntBASIC21.54■■□□□ 1.04
CCDC85AQ96PX6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CCDC85AQ96PX6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC85AQ96PX6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC85AQ96PX6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC85AQ96PX6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC85AQ96PX6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC85AQ96PX6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CCDC85AQ96PX6 HNRNPA1P28-201ENST00000424481 961 ntBASIC21.54■■□□□ 1.04
CCDC85AQ96PX6 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC21.54■■□□□ 1.04
CCDC85AQ96PX6 HTR5BP-201ENST00000430851 1154 ntBASIC21.54■■□□□ 1.04
CCDC85AQ96PX6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC85AQ96PX6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC85AQ96PX6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC21.54■■□□□ 1.04
CCDC85AQ96PX6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC85AQ96PX6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC85AQ96PX6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC85AQ96PX6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC85AQ96PX6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC85AQ96PX6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CCDC85AQ96PX6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC85AQ96PX6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC85AQ96PX6 AC007613.1-201ENST00000572811 2597 ntBASIC21.53■■□□□ 1.04
CCDC85AQ96PX6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CCDC85AQ96PX6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC85AQ96PX6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC85AQ96PX6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC85AQ96PX6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.53■■□□□ 1.04
CCDC85AQ96PX6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC85AQ96PX6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC21.53■■□□□ 1.04
CCDC85AQ96PX6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC85AQ96PX6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC85AQ96PX6 AC005829.1-201ENST00000570002 483 ntBASIC21.53■■□□□ 1.04
CCDC85AQ96PX6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC85AQ96PX6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC85AQ96PX6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC85AQ96PX6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms