Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.75■□□□□ 0.59
LRCH3Q96II8 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH3Q96II8 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.75■□□□□ 0.59
LRCH3Q96II8 FAM8A2P-201ENST00000528813 1142 ntBASIC18.75■□□□□ 0.59
LRCH3Q96II8 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.75■□□□□ 0.59
LRCH3Q96II8 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
LRCH3Q96II8 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.75■□□□□ 0.59
LRCH3Q96II8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH3Q96II8 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC18.75■□□□□ 0.59
LRCH3Q96II8 SPTSSB-204ENST00000617024 1292 ntBASIC18.75■□□□□ 0.59
LRCH3Q96II8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
LRCH3Q96II8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LRCH3Q96II8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH3Q96II8 AC138969.3-201ENST00000546612 1459 ntBASIC18.75■□□□□ 0.59
LRCH3Q96II8 AC138932.2-201ENST00000548268 1459 ntBASIC18.75■□□□□ 0.59
LRCH3Q96II8 AC126755.4-201ENST00000549796 1459 ntBASIC18.75■□□□□ 0.59
LRCH3Q96II8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH3Q96II8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH3Q96II8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH3Q96II8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.75■□□□□ 0.59
LRCH3Q96II8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.75■□□□□ 0.59
LRCH3Q96II8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH3Q96II8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH3Q96II8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH3Q96II8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.74■□□□□ 0.59
LRCH3Q96II8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH3Q96II8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.74■□□□□ 0.59
LRCH3Q96II8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH3Q96II8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH3Q96II8 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
LRCH3Q96II8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
LRCH3Q96II8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.74■□□□□ 0.59
LRCH3Q96II8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH3Q96II8 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.74■□□□□ 0.59
LRCH3Q96II8 AC241585.1-201ENST00000433527 519 ntBASIC18.74■□□□□ 0.59
LRCH3Q96II8 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.74■□□□□ 0.59
LRCH3Q96II8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.74■□□□□ 0.59
LRCH3Q96II8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.74■□□□□ 0.59
LRCH3Q96II8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.74■□□□□ 0.59
LRCH3Q96II8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.74■□□□□ 0.59
LRCH3Q96II8 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LRCH3Q96II8 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.74■□□□□ 0.59
LRCH3Q96II8 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.74■□□□□ 0.59
LRCH3Q96II8 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.74■□□□□ 0.59
LRCH3Q96II8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.74■□□□□ 0.59
LRCH3Q96II8 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH3Q96II8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH3Q96II8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
LRCH3Q96II8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH3Q96II8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.74■□□□□ 0.59
LRCH3Q96II8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH3Q96II8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.74■□□□□ 0.59
LRCH3Q96II8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH3Q96II8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH3Q96II8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH3Q96II8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH3Q96II8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.74■□□□□ 0.59
LRCH3Q96II8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.74■□□□□ 0.59
LRCH3Q96II8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.73■□□□□ 0.59
LRCH3Q96II8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH3Q96II8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH3Q96II8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
LRCH3Q96II8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.73■□□□□ 0.59
LRCH3Q96II8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH3Q96II8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LRCH3Q96II8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH3Q96II8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.73■□□□□ 0.59
LRCH3Q96II8 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH3Q96II8 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH3Q96II8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
LRCH3Q96II8 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
LRCH3Q96II8 KLF4P1-201ENST00000412782 1185 ntBASIC18.73■□□□□ 0.59
LRCH3Q96II8 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH3Q96II8 FAM185BP-201ENST00000443595 716 ntBASIC18.73■□□□□ 0.59
LRCH3Q96II8 SPTLC1P1-201ENST00000447199 261 ntBASIC18.73■□□□□ 0.59
LRCH3Q96II8 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH3Q96II8 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.73■□□□□ 0.59
LRCH3Q96II8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.73■□□□□ 0.59
LRCH3Q96II8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.73■□□□□ 0.59
LRCH3Q96II8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.73■□□□□ 0.59
LRCH3Q96II8 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.73■□□□□ 0.59
LRCH3Q96II8 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.73■□□□□ 0.59
LRCH3Q96II8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH3Q96II8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.73■□□□□ 0.59
LRCH3Q96II8 AL033527.4-201ENST00000641026 673 ntBASIC18.73■□□□□ 0.59
LRCH3Q96II8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LRCH3Q96II8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH3Q96II8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH3Q96II8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH3Q96II8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH3Q96II8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
LRCH3Q96II8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.73■□□□□ 0.59
LRCH3Q96II8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH3Q96II8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
LRCH3Q96II8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH3Q96II8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH3Q96II8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH3Q96II8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH3Q96II8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH3Q96II8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms