Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP6Q96FZ7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CHMP6Q96FZ7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP6Q96FZ7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP6Q96FZ7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP6Q96FZ7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 KRT18P23-201ENST00000435622 1283 ntBASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP6Q96FZ7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 AC092850.2-201ENST00000623821 2697 ntBASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 TMEM191A-211ENST00000637163 1067 ntBASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 AL049637.2-201ENST00000641778 930 ntBASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 PAUPAR-201ENST00000630360 2965 ntBASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.56■□□□□ 0.4
CHMP6Q96FZ7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms