Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC58Q96CX6 AC092171.3-201ENST00000610122 2651 ntBASIC16.59■□□□□ 0.25
LRRC58Q96CX6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC58Q96CX6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.59■□□□□ 0.25
LRRC58Q96CX6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC58Q96CX6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
LRRC58Q96CX6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC58Q96CX6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC58Q96CX6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LRRC58Q96CX6 AC008894.3-201ENST00000624324 3103 ntBASIC16.59■□□□□ 0.25
LRRC58Q96CX6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.58■□□□□ 0.25
LRRC58Q96CX6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LRRC58Q96CX6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
LRRC58Q96CX6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.58■□□□□ 0.25
LRRC58Q96CX6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
LRRC58Q96CX6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 RASA4DP-201ENST00000460726 1199 ntBASIC16.58■□□□□ 0.24
LRRC58Q96CX6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC58Q96CX6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 AC092068.3-201ENST00000587894 2016 ntBASIC16.57■□□□□ 0.24
LRRC58Q96CX6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 MTCL1P1-201ENST00000446207 792 ntBASIC16.57■□□□□ 0.24
LRRC58Q96CX6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRC58Q96CX6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms