Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 AC112907.2-201ENST00000448639 330 ntBASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 AC092597.1-201ENST00000487352 616 ntBASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 AC113404.2-201ENST00000507884 177 ntBASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 KRT18P21-201ENST00000515767 1272 ntBASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 AC022616.7-201ENST00000525383 220 ntBASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RTN4IP1Q8WWV3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RTN4IP1Q8WWV3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 AC016396.2-201ENST00000562575 1417 ntBASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 HBZP1-201ENST00000354915 429 ntBASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 KRT18P48-201ENST00000434763 852 ntBASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 DDX43P3-201ENST00000441064 443 ntBASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms