Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 FAM220CP-201ENST00000395253 831 ntBASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 PCED1CP-201ENST00000419887 785 ntBASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 AL845331.1-201ENST00000424978 1190 ntBASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 AC109462.3-201ENST00000573934 613 ntBASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 AC005336.2-201ENST00000593183 939 ntBASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 AL138831.2-201ENST00000606564 490 ntBASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 KRT18P1-202ENST00000452408 1331 ntBASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 TSSC2-201ENST00000450217 709 ntBASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 AC111152.3-201ENST00000569699 673 ntBASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 IER3-202ENST00000376377 1350 ntBASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 AC016734.2-201ENST00000624325 1377 ntBASIC18.16■□□□□ 0.5
TRAF3IP1Q8TDR0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms