Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 PDIA6-204ENST00000404824 2236 ntTSL 2 BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 AC017007.3-201ENST00000479865 435 ntBASIC10.79□□□□□ -0.68
SVIPQ8NHG7 ANKEF1-202ENST00000378392 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 IRF5-201ENST00000249375 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 SEPT9-206ENST00000431235 4004 ntTSL 5 BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 AC097376.2-205ENST00000610159 5334 ntBASIC10.79□□□□□ -0.68
SVIPQ8NHG7 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 ODF2-210ENST00000444119 2418 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 RANBP3-203ENST00000439268 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 HKR1-213ENST00000589392 2152 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 AC005912.2-201ENST00000619492 2400 ntBASIC10.78□□□□□ -0.68
SVIPQ8NHG7 ZBTB20-212ENST00000474710 2757 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 SLC27A6-203ENST00000506176 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 AC007601.1-201ENST00000312019 1974 ntTSL 2 BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 ACE3P-201ENST00000423435 1973 ntBASIC10.78□□□□□ -0.68
SVIPQ8NHG7 AL137127.1-201ENST00000606379 3402 ntBASIC10.78□□□□□ -0.68
SVIPQ8NHG7 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 FMO1-201ENST00000354841 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 NBPF6-201ENST00000370040 2222 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 ZNF613-202ENST00000391794 2225 ntTSL 2 BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 NBPF4-202ENST00000613157 2222 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 AP002414.2-201ENST00000591780 3365 ntBASIC10.78□□□□□ -0.68
SVIPQ8NHG7 BTD-201ENST00000303498 2075 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
SVIPQ8NHG7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC10.77□□□□□ -0.68
SVIPQ8NHG7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC10.77□□□□□ -0.68
SVIPQ8NHG7 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC10.77□□□□□ -0.68
SVIPQ8NHG7 MTA2-202ENST00000524902 2577 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
SVIPQ8NHG7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
SVIPQ8NHG7 ZFP36L1-202ENST00000439696 3190 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SVIPQ8NHG7 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SVIPQ8NHG7 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC10.77□□□□□ -0.68
SVIPQ8NHG7 CDK16-201ENST00000276052 3016 ntTSL 2 BASIC10.77□□□□□ -0.68
SVIPQ8NHG7 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC10.77□□□□□ -0.68
SVIPQ8NHG7 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SVIPQ8NHG7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
SVIPQ8NHG7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SVIPQ8NHG7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SVIPQ8NHG7 BCDIN3D-201ENST00000333924 3253 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SVIPQ8NHG7 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SVIPQ8NHG7 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 FAAP24-202ENST00000588258 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 OS9-204ENST00000389146 2091 ntTSL 2 BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC10.77□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms