Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYNPOQ8N3V7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SYNPOQ8N3V7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYNPOQ8N3V7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYNPOQ8N3V7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.65■□□□□ 0.42
SYNPOQ8N3V7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.64■□□□□ 0.42
SYNPOQ8N3V7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.64■□□□□ 0.42
SYNPOQ8N3V7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.64■□□□□ 0.42
SYNPOQ8N3V7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.42
SYNPOQ8N3V7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 CXCL1P1-201ENST00000502804 216 ntBASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 AC091812.2-201ENST00000619081 385 ntBASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.64■□□□□ 0.41
SYNPOQ8N3V7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 ACTG1P4-201ENST00000425123 1122 ntBASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 SPCS2P1-201ENST00000561636 679 ntBASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 REXO1L3P-201ENST00000622202 1288 ntBASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 AC068880.1-201ENST00000507289 2297 ntBASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SYNPOQ8N3V7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms