Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT78Q8N1N4 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.82■□□□□ 0.28
KRT78Q8N1N4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 PP12613-201ENST00000424958 2230 ntBASIC16.82■□□□□ 0.28
KRT78Q8N1N4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.82■□□□□ 0.28
KRT78Q8N1N4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 MIR3652-201ENST00000579335 131 ntBASIC16.82■□□□□ 0.28
KRT78Q8N1N4 STK25P1-201ENST00000585406 838 ntBASIC16.82■□□□□ 0.28
KRT78Q8N1N4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.82■□□□□ 0.28
KRT78Q8N1N4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 AC139713.2-201ENST00000641328 2723 ntBASIC16.82■□□□□ 0.28
KRT78Q8N1N4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT78Q8N1N4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 AC003669.1-201ENST00000334569 611 ntBASIC16.81■□□□□ 0.28
KRT78Q8N1N4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 NUS1P2-201ENST00000417358 873 ntBASIC16.81■□□□□ 0.28
KRT78Q8N1N4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 KRT16P4-201ENST00000453883 522 ntBASIC16.81■□□□□ 0.28
KRT78Q8N1N4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 STK19B-204ENST00000512515 211 ntBASIC16.81■□□□□ 0.28
KRT78Q8N1N4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 AD001527.2-201ENST00000622994 785 ntBASIC16.81■□□□□ 0.28
KRT78Q8N1N4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT78Q8N1N4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 AC046185.3-201ENST00000623228 1824 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms