Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC067863.1-201ENST00000494933 530 ntBASIC18.77■□□□□ 0.6
HERC6Q8IVU3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 DUX4L27-201ENST00000554796 1261 ntBASIC18.77■□□□□ 0.6
HERC6Q8IVU3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 AC009093.7-201ENST00000623853 1223 ntBASIC18.77■□□□□ 0.6
HERC6Q8IVU3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HERC6Q8IVU3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HERC6Q8IVU3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HERC6Q8IVU3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HERC6Q8IVU3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HERC6Q8IVU3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.76■□□□□ 0.59
HERC6Q8IVU3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
HERC6Q8IVU3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HERC6Q8IVU3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HERC6Q8IVU3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.76■□□□□ 0.59
HERC6Q8IVU3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.76■□□□□ 0.59
HERC6Q8IVU3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.76■□□□□ 0.59
HERC6Q8IVU3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.76■□□□□ 0.59
HERC6Q8IVU3 AC093214.1-201ENST00000511688 1107 ntBASIC18.76■□□□□ 0.59
HERC6Q8IVU3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.76■□□□□ 0.59
HERC6Q8IVU3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.76■□□□□ 0.59
HERC6Q8IVU3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.76■□□□□ 0.59
HERC6Q8IVU3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HERC6Q8IVU3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HERC6Q8IVU3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HERC6Q8IVU3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HERC6Q8IVU3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.76■□□□□ 0.59
HERC6Q8IVU3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 AL627223.1-201ENST00000416693 442 ntBASIC18.75■□□□□ 0.59
HERC6Q8IVU3 TIMM8BP1-201ENST00000452384 211 ntBASIC18.75■□□□□ 0.59
HERC6Q8IVU3 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 AL035252.4-201ENST00000624174 288 ntBASIC18.75■□□□□ 0.59
HERC6Q8IVU3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.75■□□□□ 0.59
HERC6Q8IVU3 BX276092.7-203ENST00000637198 1536 ntBASIC18.74■□□□□ 0.59
HERC6Q8IVU3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 AC015922.1-201ENST00000421102 1152 ntBASIC18.74■□□□□ 0.59
HERC6Q8IVU3 AC005034.1-201ENST00000426657 489 ntBASIC18.74■□□□□ 0.59
HERC6Q8IVU3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 AL513480.1-201ENST00000451731 511 ntBASIC18.74■□□□□ 0.59
HERC6Q8IVU3 INGX-202ENST00000489074 768 ntBASIC18.74■□□□□ 0.59
HERC6Q8IVU3 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 AC116407.2-201ENST00000613639 860 ntBASIC18.74■□□□□ 0.59
HERC6Q8IVU3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms