Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM50Q86XT4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.39■□□□□ 0.69
TRIM50Q86XT4 AC135050.7-201ENST00000624508 2218 ntBASIC19.39■□□□□ 0.69
TRIM50Q86XT4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM50Q86XT4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.39■□□□□ 0.69
TRIM50Q86XT4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM50Q86XT4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM50Q86XT4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
TRIM50Q86XT4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.39■□□□□ 0.69
TRIM50Q86XT4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM50Q86XT4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.39■□□□□ 0.69
TRIM50Q86XT4 AL513190.1-201ENST00000621254 727 ntBASIC19.39■□□□□ 0.69
TRIM50Q86XT4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM50Q86XT4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM50Q86XT4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM50Q86XT4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM50Q86XT4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM50Q86XT4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM50Q86XT4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM50Q86XT4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM50Q86XT4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM50Q86XT4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM50Q86XT4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TRIM50Q86XT4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TRIM50Q86XT4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM50Q86XT4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM50Q86XT4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM50Q86XT4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM50Q86XT4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM50Q86XT4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM50Q86XT4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM50Q86XT4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM50Q86XT4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM50Q86XT4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TRIM50Q86XT4 DNAJB3-201ENST00000446806 729 ntBASIC19.38■□□□□ 0.69
TRIM50Q86XT4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.38■□□□□ 0.69
TRIM50Q86XT4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM50Q86XT4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM50Q86XT4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM50Q86XT4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM50Q86XT4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM50Q86XT4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM50Q86XT4 AC046185.3-201ENST00000623228 1824 ntBASIC19.38■□□□□ 0.69
TRIM50Q86XT4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.38■□□□□ 0.69
TRIM50Q86XT4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM50Q86XT4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 AL135999.2-201ENST00000622438 1686 ntBASIC19.37■□□□□ 0.69
TRIM50Q86XT4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 RPS8P6-201ENST00000426177 609 ntBASIC19.37■□□□□ 0.69
TRIM50Q86XT4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 OR7E47P-204ENST00000575924 449 ntBASIC19.37■□□□□ 0.69
TRIM50Q86XT4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM50Q86XT4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TRIM50Q86XT4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
TRIM50Q86XT4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM50Q86XT4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM50Q86XT4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM50Q86XT4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM50Q86XT4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
TRIM50Q86XT4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM50Q86XT4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM50Q86XT4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM50Q86XT4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM50Q86XT4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM50Q86XT4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM50Q86XT4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM50Q86XT4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.36■□□□□ 0.69
TRIM50Q86XT4 PRSS29P-201ENST00000440800 595 ntBASIC19.36■□□□□ 0.69
TRIM50Q86XT4 MIR3687-2-201ENST00000577708 61 ntBASIC19.36■□□□□ 0.69
TRIM50Q86XT4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM50Q86XT4 MIR3687-1-201ENST00000614492 61 ntBASIC19.36■□□□□ 0.69
TRIM50Q86XT4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
TRIM50Q86XT4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM50Q86XT4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM50Q86XT4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.36■□□□□ 0.69
TRIM50Q86XT4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM50Q86XT4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.36■□□□□ 0.69
TRIM50Q86XT4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms