Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 AC096633.1-201ENST00000422446 749 ntBASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 ECEL1P3-201ENST00000427961 737 ntBASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 ECEL1P2-202ENST00000465689 757 ntBASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 GCSHP2-201ENST00000560971 527 ntBASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 AL391807.1-203ENST00000604392 2365 ntBASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.14■□□□□ 0.01
LRRTM1Q86UE6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 AC034232.1-201ENST00000506026 1064 ntBASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 AC092171.3-201ENST00000610122 2651 ntBASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.13■□□□□ 0.01
LRRTM1Q86UE6 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms