Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 ACAA1-213ENST00000465181 656 ntTSL 311.38□□□□□ -0.594e-6■□□□□ 9.4
LARP4Q71RC2 RIPOR1-223ENST00000569733 3370 ntTSL 211.33□□□□□ -0.64e-6■□□□□ 9.4
LARP4Q71RC2 CLN6-217ENST00000636964 3335 ntTSL 211.24□□□□□ -0.614e-6■□□□□ 9.4
LARP4Q71RC2 RIPOR1-201ENST00000042381 4051 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.614e-6■□□□□ 9.4
LARP4Q71RC2 LSM6-204ENST00000504181 549 ntTSL 211.01□□□□□ -0.654e-6■□□□□ 9.4
LARP4Q71RC2 DHPS-202ENST00000351660 1090 ntTSL 1 (best) BASIC10.95□□□□□ -0.664e-6■□□□□ 9.4
LARP4Q71RC2 KIF22-207ENST00000568312 781 ntTSL 310.89□□□□□ -0.674e-6■□□□□ 9.4
LARP4Q71RC2 TMEM165-203ENST00000506103 572 ntTSL 310.78□□□□□ -0.684e-6■□□□□ 9.4
LARP4Q71RC2 RIPOR1-203ENST00000422602 3990 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.694e-6■□□□□ 9.4
LARP4Q71RC2 DHPS-221ENST00000601537 1176 ntTSL 1 (best)10.06□□□□□ -0.84e-6■□□□□ 9.4
LARP4Q71RC2 TMEM165-212ENST00000608091 1567 ntTSL 39.87□□□□□ -0.834e-6■□□□□ 9.4
LARP4Q71RC2 MRPL20-205ENST00000492508 588 ntTSL 29.79□□□□□ -0.844e-6■□□□□ 9.4
LARP4Q71RC2 TMEM165-210ENST00000514904 1522 ntTSL 29.55□□□□□ -0.884e-6■□□□□ 9.4
LARP4Q71RC2 MPHOSPH6-201ENST00000258169 1103 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.94e-6■□□□□ 9.4
LARP4Q71RC2 DHPS-220ENST00000600864 464 ntTSL 59.27□□□□□ -0.934e-6■□□□□ 9.4
LARP4Q71RC2 DHPS-222ENST00000601639 1133 ntTSL 59.02□□□□□ -0.974e-6■□□□□ 9.4
LARP4Q71RC2 ATP5B-202ENST00000547250 840 ntTSL 58.65□□□□□ -1.024e-6■□□□□ 9.4
LARP4Q71RC2 ATP5B-209ENST00000551570 399 ntTSL 38.03□□□□□ -1.124e-6■□□□□ 9.4
LARP4Q71RC2 TMEM165-211ENST00000515591 1786 ntTSL 25.59□□□□□ -1.514e-6■□□□□ 9.4
LARP4Q71RC2 BSG-205ENST00000571735 2155 ntTSL 216.06■□□□□ 0.164e-18■□□□□ 9.4
LARP4Q71RC2 BSG-216ENST00000618112 769 ntTSL 213.97□□□□□ -0.174e-18■□□□□ 9.4
LARP4Q71RC2 CKLF-206ENST00000526149 564 ntTSL 220.54■□□□□ 0.882e-8■□□□□ 9.4
LARP4Q71RC2 RPL21-207ENST00000473558 551 ntTSL 212.06□□□□□ -0.481e-6■□□□□ 9.4
LARP4Q71RC2 RPL21-206ENST00000466550 756 ntTSL 210.32□□□□□ -0.761e-6■□□□□ 9.4
LARP4Q71RC2 KRT8-208ENST00000547031 883 ntTSL 214.89□□□□□ -0.032e-9■□□□□ 9.4
LARP4Q71RC2 LUC7L3-204ENST00000503798 663 ntTSL 37.29□□□□□ -1.249e-15■□□□□ 9.4
LARP4Q71RC2 CSE1L-201ENST00000262982 3553 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.574e-6■□□□□ 9.4
LARP4Q71RC2 CSE1L-202ENST00000396192 3459 ntTSL 5 BASIC10.94□□□□□ -0.664e-6■□□□□ 9.4
LARP4Q71RC2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.956e-10■□□□□ 9.4
LARP4Q71RC2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.164e-6■□□□□ 9.4
LARP4Q71RC2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.72■□□□□ 0.754e-6■□□□□ 9.4
LARP4Q71RC2 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.82■□□□□ 0.444e-6■□□□□ 9.4
LARP4Q71RC2 SLC2A8-210ENST00000477027 730 ntTSL 515.94■□□□□ 0.144e-6■□□□□ 9.4
LARP4Q71RC2 SLC2A8-207ENST00000430147 1030 ntTSL 315.92■□□□□ 0.144e-6■□□□□ 9.4
LARP4Q71RC2 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.19■□□□□ 0.57e-30■□□□□ 9.4
LARP4Q71RC2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.037e-30■□□□□ 9.4
LARP4Q71RC2 RPS23-204ENST00000507980 836 ntTSL 2 BASIC12.64□□□□□ -0.397e-30■□□□□ 9.4
LARP4Q71RC2 RPS23-207ENST00000511844 530 ntTSL 2 BASIC12.47□□□□□ -0.414e-45■□□□□ 9.4
LARP4Q71RC2 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC11.11□□□□□ -0.637e-30■□□□□ 9.4
LARP4Q71RC2 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.8□□□□□ -1.327e-30■□□□□ 9.4
LARP4Q71RC2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.43■□□□□ 0.77e-8■□□□□ 9.4
LARP4Q71RC2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.537e-8■□□□□ 9.4
LARP4Q71RC2 EMC8-205ENST00000597291 1826 nt16.29■□□□□ 0.27e-8■□□□□ 9.4
LARP4Q71RC2 EMC8-203ENST00000595980 556 ntTSL 211.93□□□□□ -0.57e-8■□□□□ 9.4
LARP4Q71RC2 BTF3-206ENST00000510787 610 ntTSL 215.19■□□□□ 0.021e-9■□□□□ 9.4
LARP4Q71RC2 PRKCSH-216ENST00000592445 598 ntTSL 217.66■□□□□ 0.422e-11■□□□□ 9.4
LARP4Q71RC2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.342e-11■□□□□ 9.4
LARP4Q71RC2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.81■□□□□ 0.282e-11■□□□□ 9.4
LARP4Q71RC2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.272e-11■□□□□ 9.4
LARP4Q71RC2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.232e-11■□□□□ 9.4
LARP4Q71RC2 PRKCSH-202ENST00000585540 501 ntTSL 312.72□□□□□ -0.372e-11■□□□□ 9.4
LARP4Q71RC2 PRKCSH-201ENST00000585325 598 ntTSL 412.18□□□□□ -0.462e-11■□□□□ 9.4
LARP4Q71RC2 KPNA2-201ENST00000330459 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.872e-11■□□□□ 9.4
LARP4Q71RC2 ENC1-204ENST00000509284 571 ntTSL 49.11□□□□□ -0.952e-11■□□□□ 9.4
LARP4Q71RC2 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.131e-7■□□□□ 9.4
LARP4Q71RC2 PRCP-202ENST00000393399 2120 ntTSL 2 BASIC8.82□□□□□ -11e-7■□□□□ 9.4
LARP4Q71RC2 PRCP-213ENST00000532709 2521 ntTSL 27.5□□□□□ -1.211e-7■□□□□ 9.4
LARP4Q71RC2 RPS2-204ENST00000526908 638 ntTSL 218.48■□□□□ 0.556e-8■□□□□ 9.4
LARP4Q71RC2 RPS2-216ENST00000534461 734 ntTSL 216.6■□□□□ 0.256e-8■□□□□ 9.4
LARP4Q71RC2 RPS2-212ENST00000532746 931 ntTSL 38.06□□□□□ -1.126e-8■□□□□ 9.4
LARP4Q71RC2 USP48-214ENST00000532737 680 ntTSL 423.1■■□□□ 1.292e-8■□□□□ 9.4
LARP4Q71RC2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.35■■□□□ 1.012e-8■□□□□ 9.4
LARP4Q71RC2 PRKCSH-208ENST00000589126 625 ntTSL 512.33□□□□□ -0.442e-8■□□□□ 9.4
LARP4Q71RC2 PRKCSH-210ENST00000589990 567 ntTSL 211.4□□□□□ -0.582e-8■□□□□ 9.4
LARP4Q71RC2 HMMR-201ENST00000353866 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.822e-8■□□□□ 9.4
LARP4Q71RC2 ZNF146-202ENST00000456324 3780 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.942e-6■□□□□ 9.4
LARP4Q71RC2 BTF3-204ENST00000508901 954 ntTSL 27.27□□□□□ -1.252e-8■□□□□ 9.4
LARP4Q71RC2 USP48-212ENST00000527823 554 ntTSL 47.12□□□□□ -1.272e-8■□□□□ 9.4
LARP4Q71RC2 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.462e-6■□□□□ 9.4
LARP4Q71RC2 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.52e-8■□□□□ 9.4
LARP4Q71RC2 BTF3-203ENST00000507081 377 ntTSL 55.42□□□□□ -1.542e-8■□□□□ 9.4
LARP4Q71RC2 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.582e-8■□□□□ 9.4
LARP4Q71RC2 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.612e-8■□□□□ 9.4
LARP4Q71RC2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.133e-17■□□□□ 9.4
LARP4Q71RC2 FLOT1-212ENST00000487376 1583 ntTSL 518.05■□□□□ 0.483e-17■□□□□ 9.4
LARP4Q71RC2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.35■□□□□ 0.212e-7■□□□□ 9.4
LARP4Q71RC2 RPL11-203ENST00000458455 721 ntTSL 1 (best)11.1□□□□□ -0.633e-21■□□□□ 9.4
LARP4Q71RC2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.752e-8■□□□□ 9.3
LARP4Q71RC2 BLOC1S5-TXNDC5-201ENST00000439343 3030 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.512e-8■□□□□ 9.3
LARP4Q71RC2 TXNDC5-202ENST00000460138 2704 ntTSL 210.64□□□□□ -0.712e-8■□□□□ 9.3
LARP4Q71RC2 HINT1-204ENST00000506908 681 ntTSL 2 BASIC12.77□□□□□ -0.373e-10■□□□□ 9.3
LARP4Q71RC2 HINT1-205ENST00000508488 703 ntTSL 2 BASIC12.74□□□□□ -0.373e-10■□□□□ 9.3
LARP4Q71RC2 HINT1-208ENST00000513012 583 ntTSL 4 BASIC10.47□□□□□ -0.733e-10■□□□□ 9.3
LARP4Q71RC2 HINT1-210ENST00000520028 82 ntTSL 35.39□□□□□ -1.553e-10■□□□□ 9.3
LARP4Q71RC2 RPLP0-204ENST00000546564 844 ntTSL 211.56□□□□□ -0.566e-10■□□□□ 9.3
LARP4Q71RC2 RPLP0-217ENST00000550423 561 ntTSL 311.05□□□□□ -0.646e-10■□□□□ 9.3
LARP4Q71RC2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.961e-61■□□□□ 9.3
LARP4Q71RC2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.941e-61■□□□□ 9.3
LARP4Q71RC2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.32■□□□□ 0.681e-61■□□□□ 9.3
LARP4Q71RC2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.661e-7■□□□□ 9.3
LARP4Q71RC2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.17■□□□□ 0.981e-7■□□□□ 9.3
LARP4Q71RC2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.87■□□□□ 0.931e-7■□□□□ 9.3
LARP4Q71RC2 TP53I13-206ENST00000579674 2468 nt20.03■□□□□ 0.81e-7■□□□□ 9.3
LARP4Q71RC2 TP53I13-202ENST00000378818 420 ntAPPRIS ALT2 TSL 319.65■□□□□ 0.741e-7■□□□□ 9.3
LARP4Q71RC2 HNF4A-203ENST00000372920 3340 ntTSL 1 (best)18.16■□□□□ 0.51e-7■□□□□ 9.3
LARP4Q71RC2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.418e-13■□□□□ 9.3
LARP4Q71RC2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.378e-13■□□□□ 9.3
LARP4Q71RC2 RXRA-201ENST00000356384 5770 ntTSL 515.26■□□□□ 0.031e-7■□□□□ 9.3
LARP4Q71RC2 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.28e-13■□□□□ 9.3
LARP4Q71RC2 COX16-204ENST00000557612 627 ntTSL 211.04□□□□□ -0.644e-6■□□□□ 9.3
Retrieved 100 of 15,922 protein–RNA pairs in 341.8 ms