Protein–RNA interactions for Protein: Q6P2S7

TTC41P, Putative tetratricopeptide repeat protein 41, humanhuman

Predictions only

Length 1,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41PQ6P2S7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC21.11■□□□□ 0.97
TTC41PQ6P2S7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC41PQ6P2S7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.11■□□□□ 0.97
TTC41PQ6P2S7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC41PQ6P2S7 AC020916.1-201ENST00000587762 1774 ntBASIC21.11■□□□□ 0.97
TTC41PQ6P2S7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC41PQ6P2S7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC41PQ6P2S7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC41PQ6P2S7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
TTC41PQ6P2S7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
TTC41PQ6P2S7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 AC021087.4-201ENST00000563761 564 ntBASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 RN7SL510P-201ENST00000581311 263 ntBASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 AL121912.1-201ENST00000603683 238 ntBASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TTC41PQ6P2S7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 AC064862.7-201ENST00000604520 867 ntBASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TTC41PQ6P2S7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TTC41PQ6P2S7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TTC41PQ6P2S7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TTC41PQ6P2S7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.08■□□□□ 0.97
TTC41PQ6P2S7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TTC41PQ6P2S7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TTC41PQ6P2S7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TTC41PQ6P2S7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TTC41PQ6P2S7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.08■□□□□ 0.97
TTC41PQ6P2S7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.08■□□□□ 0.97
TTC41PQ6P2S7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TTC41PQ6P2S7 AC124947.2-201ENST00000547118 1133 ntBASIC21.08■□□□□ 0.97
TTC41PQ6P2S7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.08■□□□□ 0.97
TTC41PQ6P2S7 TP73-AS1-207ENST00000624167 988 ntBASIC21.08■□□□□ 0.97
TTC41PQ6P2S7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.08■□□□□ 0.97
TTC41PQ6P2S7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
TTC41PQ6P2S7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TTC41PQ6P2S7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TTC41PQ6P2S7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.08■□□□□ 0.97
TTC41PQ6P2S7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TTC41PQ6P2S7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms