Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC21.72■■□□□ 1.07
RC3H1Q5TC82 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.72■■□□□ 1.07
RC3H1Q5TC82 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RC3H1Q5TC82 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
RC3H1Q5TC82 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RC3H1Q5TC82 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21.72■■□□□ 1.07
RC3H1Q5TC82 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RC3H1Q5TC82 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.71■■□□□ 1.07
RC3H1Q5TC82 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.71■■□□□ 1.07
RC3H1Q5TC82 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RC3H1Q5TC82 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC21.71■■□□□ 1.07
RC3H1Q5TC82 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RC3H1Q5TC82 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RC3H1Q5TC82 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC21.71■■□□□ 1.07
RC3H1Q5TC82 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RC3H1Q5TC82 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC21.71■■□□□ 1.07
RC3H1Q5TC82 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC21.71■■□□□ 1.07
RC3H1Q5TC82 GSAP-205ENST00000430584 600 ntTSL 5 BASIC21.71■■□□□ 1.07
RC3H1Q5TC82 AL390754.1-201ENST00000619088 582 ntBASIC21.71■■□□□ 1.07
RC3H1Q5TC82 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.71■■□□□ 1.07
RC3H1Q5TC82 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.71■■□□□ 1.07
RC3H1Q5TC82 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RC3H1Q5TC82 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RC3H1Q5TC82 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RC3H1Q5TC82 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.71■■□□□ 1.07
RC3H1Q5TC82 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RC3H1Q5TC82 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RC3H1Q5TC82 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RC3H1Q5TC82 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RC3H1Q5TC82 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC21.7■■□□□ 1.06
RC3H1Q5TC82 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.7■■□□□ 1.06
RC3H1Q5TC82 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RC3H1Q5TC82 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RC3H1Q5TC82 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RC3H1Q5TC82 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.7■■□□□ 1.06
RC3H1Q5TC82 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RC3H1Q5TC82 MIR346-201ENST00000362234 95 ntBASIC21.7■■□□□ 1.06
RC3H1Q5TC82 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RC3H1Q5TC82 GK-202ENST00000378941 458 ntTSL 3 BASIC21.7■■□□□ 1.06
RC3H1Q5TC82 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC21.7■■□□□ 1.06
RC3H1Q5TC82 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RC3H1Q5TC82 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RC3H1Q5TC82 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
RC3H1Q5TC82 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC21.7■■□□□ 1.06
RC3H1Q5TC82 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.7■■□□□ 1.06
RC3H1Q5TC82 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RC3H1Q5TC82 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RC3H1Q5TC82 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RC3H1Q5TC82 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC21.7■■□□□ 1.06
RC3H1Q5TC82 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.7■■□□□ 1.06
RC3H1Q5TC82 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.69■■□□□ 1.06
RC3H1Q5TC82 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.69■■□□□ 1.06
RC3H1Q5TC82 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RC3H1Q5TC82 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RC3H1Q5TC82 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC21.69■■□□□ 1.06
RC3H1Q5TC82 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RC3H1Q5TC82 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RC3H1Q5TC82 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RC3H1Q5TC82 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.69■■□□□ 1.06
RC3H1Q5TC82 AC069120.2-201ENST00000524091 540 ntBASIC21.69■■□□□ 1.06
RC3H1Q5TC82 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RC3H1Q5TC82 COX11-202ENST00000571584 1108 ntTSL 2 BASIC21.69■■□□□ 1.06
RC3H1Q5TC82 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RC3H1Q5TC82 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
RC3H1Q5TC82 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RC3H1Q5TC82 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RC3H1Q5TC82 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RC3H1Q5TC82 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RC3H1Q5TC82 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RC3H1Q5TC82 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 HLA-J-202ENST00000469281 1241 ntBASIC21.68■■□□□ 1.06
RC3H1Q5TC82 ALG1L8P-201ENST00000533887 760 ntBASIC21.68■■□□□ 1.06
RC3H1Q5TC82 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 COQ6-210ENST00000554920 649 ntTSL 3 BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 WASH6P-202ENST00000359512 1437 ntBASIC21.68■■□□□ 1.06
RC3H1Q5TC82 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RC3H1Q5TC82 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms