Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC079776.1-201ENST00000401540 1152 ntBASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 INE1-201ENST00000456273 945 ntBASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 GNAS-203ENST00000306120 1878 ntBASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 AL161938.1-201ENST00000569833 2180 ntBASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 LINC01225-203ENST00000563550 1244 ntBASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 AC109462.3-201ENST00000573934 613 ntBASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RSPO4Q2I0M5 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 AC112492.5-201ENST00000421897 457 ntBASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 RAB43P1-201ENST00000561790 589 ntBASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 AC073592.8-201ENST00000624126 511 ntBASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 AL020996.1-203ENST00000536896 2307 ntBASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
RSPO4Q2I0M5 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RSPO4Q2I0M5 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms