Protein–RNA interactions for Protein: Q09161

NCBP1, Nuclear cap-binding protein subunit 1, humanhuman

Known RBP Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1Q09161 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
NCBP1Q09161 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.76■□□□□ 0.75
NCBP1Q09161 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCBP1Q09161 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.76■□□□□ 0.75
NCBP1Q09161 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCBP1Q09161 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.76■□□□□ 0.75
NCBP1Q09161 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCBP1Q09161 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
NCBP1Q09161 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NCBP1Q09161 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.76■□□□□ 0.75
NCBP1Q09161 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCBP1Q09161 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCBP1Q09161 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCBP1Q09161 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NCBP1Q09161 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCBP1Q09161 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.76■□□□□ 0.75
NCBP1Q09161 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.76■□□□□ 0.75
NCBP1Q09161 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.76■□□□□ 0.75
NCBP1Q09161 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.76■□□□□ 0.75
NCBP1Q09161 AL121894.2-201ENST00000602977 491 ntBASIC19.76■□□□□ 0.75
NCBP1Q09161 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.76■□□□□ 0.75
NCBP1Q09161 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NCBP1Q09161 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCBP1Q09161 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NCBP1Q09161 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NCBP1Q09161 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
NCBP1Q09161 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NCBP1Q09161 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCBP1Q09161 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NCBP1Q09161 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCBP1Q09161 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCBP1Q09161 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCBP1Q09161 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.76■□□□□ 0.75
NCBP1Q09161 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
NCBP1Q09161 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.76■□□□□ 0.75
NCBP1Q09161 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.75■□□□□ 0.75
NCBP1Q09161 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.75■□□□□ 0.75
NCBP1Q09161 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NCBP1Q09161 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
NCBP1Q09161 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.75■□□□□ 0.75
NCBP1Q09161 AL513477.1-201ENST00000602865 2407 ntBASIC19.75■□□□□ 0.75
NCBP1Q09161 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCBP1Q09161 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.75■□□□□ 0.75
NCBP1Q09161 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCBP1Q09161 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NCBP1Q09161 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NCBP1Q09161 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NCBP1Q09161 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.75■□□□□ 0.75
NCBP1Q09161 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCBP1Q09161 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.75■□□□□ 0.75
NCBP1Q09161 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.75■□□□□ 0.75
NCBP1Q09161 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.75■□□□□ 0.75
NCBP1Q09161 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
NCBP1Q09161 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NCBP1Q09161 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NCBP1Q09161 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NCBP1Q09161 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCBP1Q09161 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.75■□□□□ 0.75
NCBP1Q09161 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.75■□□□□ 0.75
NCBP1Q09161 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.75■□□□□ 0.75
NCBP1Q09161 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.75■□□□□ 0.75
NCBP1Q09161 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NCBP1Q09161 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NCBP1Q09161 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.75■□□□□ 0.75
NCBP1Q09161 IFNL4P1-201ENST00000607083 540 ntBASIC19.75■□□□□ 0.75
NCBP1Q09161 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.75■□□□□ 0.75
NCBP1Q09161 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NCBP1Q09161 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NCBP1Q09161 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCBP1Q09161 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.75■□□□□ 0.75
NCBP1Q09161 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCBP1Q09161 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NCBP1Q09161 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.75■□□□□ 0.75
NCBP1Q09161 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
NCBP1Q09161 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCBP1Q09161 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.75■□□□□ 0.75
NCBP1Q09161 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCBP1Q09161 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.75■□□□□ 0.75
NCBP1Q09161 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.75■□□□□ 0.75
NCBP1Q09161 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCBP1Q09161 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCBP1Q09161 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NCBP1Q09161 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
NCBP1Q09161 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
NCBP1Q09161 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCBP1Q09161 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NCBP1Q09161 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCBP1Q09161 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCBP1Q09161 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.74■□□□□ 0.75
NCBP1Q09161 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NCBP1Q09161 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCBP1Q09161 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCBP1Q09161 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.74■□□□□ 0.75
NCBP1Q09161 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.74■□□□□ 0.75
NCBP1Q09161 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.74■□□□□ 0.75
NCBP1Q09161 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.74■□□□□ 0.75
NCBP1Q09161 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCBP1Q09161 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.74■□□□□ 0.75
NCBP1Q09161 AP005901.3-202ENST00000581653 237 ntBASIC19.74■□□□□ 0.75
NCBP1Q09161 AL732292.2-201ENST00000609649 430 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms