Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
GABREP78334 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
GABREP78334 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GABREP78334 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GABREP78334 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GABREP78334 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GABREP78334 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GABREP78334 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.5■□□□□ 0.23
GABREP78334 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.5■□□□□ 0.23
GABREP78334 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.5■□□□□ 0.23
GABREP78334 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.5■□□□□ 0.23
GABREP78334 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.5■□□□□ 0.23
GABREP78334 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.5■□□□□ 0.23
GABREP78334 AC109322.1-201ENST00000524499 1264 ntBASIC16.5■□□□□ 0.23
GABREP78334 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
GABREP78334 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.5■□□□□ 0.23
GABREP78334 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
GABREP78334 LINC00628-201ENST00000628516 1289 ntBASIC16.5■□□□□ 0.23
GABREP78334 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.5■□□□□ 0.23
GABREP78334 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GABREP78334 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GABREP78334 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GABREP78334 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GABREP78334 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
GABREP78334 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.5■□□□□ 0.23
GABREP78334 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
GABREP78334 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.5■□□□□ 0.23
GABREP78334 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GABREP78334 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.5■□□□□ 0.23
GABREP78334 HTR7P1-202ENST00000624664 4411 ntBASIC16.5■□□□□ 0.23
GABREP78334 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.5■□□□□ 0.23
GABREP78334 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
GABREP78334 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
GABREP78334 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GABREP78334 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
GABREP78334 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GABREP78334 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.49■□□□□ 0.23
GABREP78334 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GABREP78334 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GABREP78334 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
GABREP78334 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
GABREP78334 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GABREP78334 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GABREP78334 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
GABREP78334 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.49■□□□□ 0.23
GABREP78334 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.49■□□□□ 0.23
GABREP78334 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
GABREP78334 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.49■□□□□ 0.23
GABREP78334 DDX43P3-201ENST00000441064 443 ntBASIC16.49■□□□□ 0.23
GABREP78334 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GABREP78334 PAWRP1-201ENST00000451083 565 ntBASIC16.49■□□□□ 0.23
GABREP78334 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.49■□□□□ 0.23
GABREP78334 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GABREP78334 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.49■□□□□ 0.23
GABREP78334 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.49■□□□□ 0.23
GABREP78334 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.49■□□□□ 0.23
GABREP78334 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.49■□□□□ 0.23
GABREP78334 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.49■□□□□ 0.23
GABREP78334 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.49■□□□□ 0.23
GABREP78334 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.49■□□□□ 0.23
GABREP78334 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.49■□□□□ 0.23
GABREP78334 AC005498.2-205ENST00000593218 784 ntBASIC16.49■□□□□ 0.23
GABREP78334 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.49■□□□□ 0.23
GABREP78334 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.49■□□□□ 0.23
GABREP78334 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GABREP78334 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
GABREP78334 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GABREP78334 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.49■□□□□ 0.23
GABREP78334 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.49■□□□□ 0.23
GABREP78334 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
GABREP78334 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GABREP78334 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GABREP78334 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GABREP78334 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.49■□□□□ 0.23
GABREP78334 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GABREP78334 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
GABREP78334 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GABREP78334 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
GABREP78334 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GABREP78334 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GABREP78334 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GABREP78334 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.48■□□□□ 0.23
GABREP78334 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GABREP78334 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GABREP78334 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GABREP78334 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GABREP78334 MIR4745-201ENST00000577608 62 ntBASIC16.48■□□□□ 0.23
GABREP78334 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.48■□□□□ 0.23
GABREP78334 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.48■□□□□ 0.23
GABREP78334 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.48■□□□□ 0.23
GABREP78334 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.48■□□□□ 0.23
GABREP78334 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.48■□□□□ 0.23
GABREP78334 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GABREP78334 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GABREP78334 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GABREP78334 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GABREP78334 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.48■□□□□ 0.23
GABREP78334 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.48■□□□□ 0.23
GABREP78334 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
GABREP78334 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms