Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.34■□□□□ 0.05
UBE2NP61088 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBE2NP61088 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.34■□□□□ 0.05
UBE2NP61088 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.34■□□□□ 0.05
UBE2NP61088 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBE2NP61088 AC005104.2-201ENST00000427818 678 ntBASIC15.34■□□□□ 0.05
UBE2NP61088 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.34■□□□□ 0.05
UBE2NP61088 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.34■□□□□ 0.05
UBE2NP61088 STK19B-204ENST00000512515 211 ntBASIC15.34■□□□□ 0.05
UBE2NP61088 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
UBE2NP61088 AL121894.2-201ENST00000602977 491 ntBASIC15.34■□□□□ 0.05
UBE2NP61088 AC064862.7-201ENST00000604520 867 ntBASIC15.34■□□□□ 0.05
UBE2NP61088 AC019129.2-201ENST00000609837 1235 ntBASIC15.34■□□□□ 0.05
UBE2NP61088 AL139288.1-201ENST00000623748 933 ntBASIC15.34■□□□□ 0.05
UBE2NP61088 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UBE2NP61088 AL356309.3-201ENST00000624132 1934 ntBASIC15.34■□□□□ 0.05
UBE2NP61088 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.34■□□□□ 0.05
UBE2NP61088 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBE2NP61088 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
UBE2NP61088 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UBE2NP61088 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
UBE2NP61088 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UBE2NP61088 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBE2NP61088 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBE2NP61088 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBE2NP61088 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.34■□□□□ 0.05
UBE2NP61088 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.34■□□□□ 0.05
UBE2NP61088 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.34■□□□□ 0.05
UBE2NP61088 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
UBE2NP61088 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBE2NP61088 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.34■□□□□ 0.05
UBE2NP61088 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBE2NP61088 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.34■□□□□ 0.05
UBE2NP61088 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
UBE2NP61088 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
UBE2NP61088 PMPCAP1-201ENST00000508114 1576 ntBASIC15.33■□□□□ 0.05
UBE2NP61088 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
UBE2NP61088 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.33■□□□□ 0.04
UBE2NP61088 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBE2NP61088 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
UBE2NP61088 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBE2NP61088 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UBE2NP61088 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.33■□□□□ 0.04
UBE2NP61088 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBE2NP61088 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.33■□□□□ 0.04
UBE2NP61088 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBE2NP61088 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.33■□□□□ 0.04
UBE2NP61088 AC073648.2-201ENST00000510116 352 ntBASIC15.33■□□□□ 0.04
UBE2NP61088 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.33■□□□□ 0.04
UBE2NP61088 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.33■□□□□ 0.04
UBE2NP61088 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.33■□□□□ 0.04
UBE2NP61088 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.33■□□□□ 0.04
UBE2NP61088 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.33■□□□□ 0.04
UBE2NP61088 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.33■□□□□ 0.04
UBE2NP61088 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBE2NP61088 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBE2NP61088 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBE2NP61088 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UBE2NP61088 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.33■□□□□ 0.04
UBE2NP61088 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.33■□□□□ 0.04
UBE2NP61088 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBE2NP61088 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.33■□□□□ 0.04
UBE2NP61088 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
UBE2NP61088 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.33■□□□□ 0.04
UBE2NP61088 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
UBE2NP61088 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.33■□□□□ 0.04
UBE2NP61088 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBE2NP61088 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
UBE2NP61088 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBE2NP61088 HLA-J-201ENST00000462773 1622 ntBASIC15.32■□□□□ 0.04
UBE2NP61088 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBE2NP61088 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBE2NP61088 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.32■□□□□ 0.04
UBE2NP61088 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.32■□□□□ 0.04
UBE2NP61088 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.32■□□□□ 0.04
UBE2NP61088 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBE2NP61088 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.32■□□□□ 0.04
UBE2NP61088 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
UBE2NP61088 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBE2NP61088 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBE2NP61088 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBE2NP61088 AL020989.1-201ENST00000422979 469 ntBASIC15.32■□□□□ 0.04
UBE2NP61088 FGFR3P6-201ENST00000457012 610 ntBASIC15.32■□□□□ 0.04
UBE2NP61088 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.32■□□□□ 0.04
UBE2NP61088 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.32■□□□□ 0.04
UBE2NP61088 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.32■□□□□ 0.04
UBE2NP61088 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBE2NP61088 AL031008.1-201ENST00000619963 541 ntBASIC15.32■□□□□ 0.04
UBE2NP61088 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.32■□□□□ 0.04
UBE2NP61088 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
UBE2NP61088 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBE2NP61088 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
UBE2NP61088 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.32■□□□□ 0.04
UBE2NP61088 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBE2NP61088 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
UBE2NP61088 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
UBE2NP61088 AC134043.2-201ENST00000624206 2238 ntBASIC15.32■□□□□ 0.04
UBE2NP61088 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBE2NP61088 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBE2NP61088 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms