Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.9■□□□□ 0.14
CXCR4P61073 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCR4P61073 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCR4P61073 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CXCR4P61073 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCR4P61073 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCR4P61073 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.9■□□□□ 0.14
CXCR4P61073 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCR4P61073 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCR4P61073 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
CXCR4P61073 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.89■□□□□ 0.13
CXCR4P61073 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.89■□□□□ 0.13
CXCR4P61073 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CXCR4P61073 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CXCR4P61073 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CXCR4P61073 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CXCR4P61073 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CXCR4P61073 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.89■□□□□ 0.13
CXCR4P61073 AC113404.2-201ENST00000507884 177 ntBASIC15.89■□□□□ 0.13
CXCR4P61073 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.89■□□□□ 0.13
CXCR4P61073 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.89■□□□□ 0.13
CXCR4P61073 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.89■□□□□ 0.13
CXCR4P61073 AC024243.1-201ENST00000609234 778 ntBASIC15.89■□□□□ 0.13
CXCR4P61073 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.89■□□□□ 0.13
CXCR4P61073 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.89■□□□□ 0.13
CXCR4P61073 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.89■□□□□ 0.13
CXCR4P61073 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.89■□□□□ 0.13
CXCR4P61073 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.89■□□□□ 0.13
CXCR4P61073 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.89■□□□□ 0.13
CXCR4P61073 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.89■□□□□ 0.13
CXCR4P61073 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.89■□□□□ 0.13
CXCR4P61073 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CXCR4P61073 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CXCR4P61073 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.88■□□□□ 0.13
CXCR4P61073 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CXCR4P61073 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 KRT18P65-201ENST00000439811 1286 ntBASIC15.88■□□□□ 0.13
CXCR4P61073 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
CXCR4P61073 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.88■□□□□ 0.13
CXCR4P61073 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.88■□□□□ 0.13
CXCR4P61073 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.88■□□□□ 0.13
CXCR4P61073 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.88■□□□□ 0.13
CXCR4P61073 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
CXCR4P61073 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CXCR4P61073 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CXCR4P61073 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
CXCR4P61073 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms