Protein–RNA interactions for Protein: P57768

SNX16, Sorting nexin-16, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16P57768 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SNX16P57768 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.39■□□□□ 0.53
SNX16P57768 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SNX16P57768 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.39■□□□□ 0.53
SNX16P57768 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.39■□□□□ 0.53
SNX16P57768 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.39■□□□□ 0.53
SNX16P57768 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.39■□□□□ 0.53
SNX16P57768 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SNX16P57768 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.39■□□□□ 0.53
SNX16P57768 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SNX16P57768 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SNX16P57768 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
SNX16P57768 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNX16P57768 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.39■□□□□ 0.53
SNX16P57768 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNX16P57768 AC132938.5-201ENST00000624980 1813 ntBASIC18.39■□□□□ 0.53
SNX16P57768 AP005117.1-201ENST00000584346 1413 ntBASIC18.39■□□□□ 0.53
SNX16P57768 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.39■□□□□ 0.53
SNX16P57768 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SNX16P57768 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SNX16P57768 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNX16P57768 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SNX16P57768 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.38■□□□□ 0.53
SNX16P57768 LETM1P2-201ENST00000597330 2178 ntBASIC18.38■□□□□ 0.53
SNX16P57768 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX16P57768 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX16P57768 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SNX16P57768 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX16P57768 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNX16P57768 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX16P57768 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SNX16P57768 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX16P57768 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX16P57768 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX16P57768 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.38■□□□□ 0.53
SNX16P57768 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNX16P57768 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX16P57768 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNX16P57768 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.38■□□□□ 0.53
SNX16P57768 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX16P57768 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX16P57768 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
SNX16P57768 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.38■□□□□ 0.53
SNX16P57768 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.38■□□□□ 0.53
SNX16P57768 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.38■□□□□ 0.53
SNX16P57768 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNX16P57768 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX16P57768 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.38■□□□□ 0.53
SNX16P57768 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.38■□□□□ 0.53
SNX16P57768 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.38■□□□□ 0.53
SNX16P57768 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.38■□□□□ 0.53
SNX16P57768 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.38■□□□□ 0.53
SNX16P57768 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX16P57768 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SNX16P57768 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.38■□□□□ 0.53
SNX16P57768 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX16P57768 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX16P57768 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.38■□□□□ 0.53
SNX16P57768 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
SNX16P57768 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX16P57768 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.37■□□□□ 0.53
SNX16P57768 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX16P57768 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SNX16P57768 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX16P57768 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.37■□□□□ 0.53
SNX16P57768 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX16P57768 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX16P57768 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX16P57768 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX16P57768 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX16P57768 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX16P57768 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX16P57768 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.37■□□□□ 0.53
SNX16P57768 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.37■□□□□ 0.53
SNX16P57768 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.37■□□□□ 0.53
SNX16P57768 AC106795.1-205ENST00000512851 1056 ntBASIC18.37■□□□□ 0.53
SNX16P57768 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.37■□□□□ 0.53
SNX16P57768 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.37■□□□□ 0.53
SNX16P57768 CLEC4GP1-201ENST00000596555 870 ntBASIC18.37■□□□□ 0.53
SNX16P57768 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SNX16P57768 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX16P57768 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX16P57768 SIGLEC16-201ENST00000599858 1437 ntBASIC18.37■□□□□ 0.53
SNX16P57768 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX16P57768 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
SNX16P57768 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX16P57768 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX16P57768 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX16P57768 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
SNX16P57768 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX16P57768 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.37■□□□□ 0.53
SNX16P57768 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SNX16P57768 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SNX16P57768 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX16P57768 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX16P57768 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.37■□□□□ 0.53
SNX16P57768 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX16P57768 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX16P57768 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX16P57768 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms