Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDN12P56749 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN12P56749 PVRIG2P-201ENST00000435460 978 ntBASIC15.18■□□□□ 0.02
CLDN12P56749 KRT18P65-201ENST00000439811 1286 ntBASIC15.18■□□□□ 0.02
CLDN12P56749 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.18■□□□□ 0.02
CLDN12P56749 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN12P56749 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.18■□□□□ 0.02
CLDN12P56749 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.18■□□□□ 0.02
CLDN12P56749 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN12P56749 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN12P56749 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN12P56749 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.18■□□□□ 0.02
CLDN12P56749 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN12P56749 AL157888.1-201ENST00000631930 593 ntBASIC15.18■□□□□ 0.02
CLDN12P56749 AC092865.7-201ENST00000641832 219 ntBASIC15.18■□□□□ 0.02
CLDN12P56749 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN12P56749 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
CLDN12P56749 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN12P56749 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN12P56749 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN12P56749 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN12P56749 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN12P56749 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN12P56749 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDN12P56749 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
CLDN12P56749 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN12P56749 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN12P56749 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.17■□□□□ 0.02
CLDN12P56749 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CLDN12P56749 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 BX276092.7-203ENST00000637198 1536 ntBASIC15.17■□□□□ 0.02
CLDN12P56749 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.17■□□□□ 0.02
CLDN12P56749 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN12P56749 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN12P56749 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN12P56749 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.17■□□□□ 0.02
CLDN12P56749 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
CLDN12P56749 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.17■□□□□ 0.02
CLDN12P56749 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CLDN12P56749 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.17■□□□□ 0.02
CLDN12P56749 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.17■□□□□ 0.02
CLDN12P56749 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CLDN12P56749 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.17■□□□□ 0.02
CLDN12P56749 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.17■□□□□ 0.02
CLDN12P56749 FAM201B-201ENST00000458407 597 ntBASIC15.17■□□□□ 0.02
CLDN12P56749 AC113404.2-201ENST00000507884 177 ntBASIC15.17■□□□□ 0.02
CLDN12P56749 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN12P56749 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.17■□□□□ 0.02
CLDN12P56749 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN12P56749 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 LINC02012-201ENST00000608206 1725 ntBASIC15.17■□□□□ 0.02
CLDN12P56749 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 AC011270.2-201ENST00000624293 2550 ntBASIC15.17■□□□□ 0.02
CLDN12P56749 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN12P56749 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 AC078925.2-201ENST00000624013 1973 ntBASIC15.16■□□□□ 0.02
CLDN12P56749 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.16■□□□□ 0.02
CLDN12P56749 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CLDN12P56749 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.16■□□□□ 0.02
CLDN12P56749 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN12P56749 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CLDN12P56749 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.16■□□□□ 0.02
CLDN12P56749 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.16■□□□□ 0.02
CLDN12P56749 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CLDN12P56749 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms