Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC011767.1-201ENST00000617410 1153 ntBASIC17.11■□□□□ 0.33
GTF2A1P52655 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.11■□□□□ 0.33
GTF2A1P52655 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
GTF2A1P52655 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC17.11■□□□□ 0.33
GTF2A1P52655 AL391807.1-203ENST00000604392 2365 ntBASIC17.11■□□□□ 0.33
GTF2A1P52655 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GTF2A1P52655 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
GTF2A1P52655 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.11■□□□□ 0.33
GTF2A1P52655 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GTF2A1P52655 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GTF2A1P52655 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GTF2A1P52655 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
GTF2A1P52655 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GTF2A1P52655 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GTF2A1P52655 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GTF2A1P52655 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
GTF2A1P52655 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GTF2A1P52655 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GTF2A1P52655 KRT17P1-201ENST00000399211 1546 ntBASIC17.11■□□□□ 0.33
GTF2A1P52655 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.11■□□□□ 0.33
GTF2A1P52655 OR2I1P-210ENST00000642037 4691 ntBASIC17.11■□□□□ 0.33
GTF2A1P52655 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.11■□□□□ 0.33
GTF2A1P52655 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.11■□□□□ 0.33
GTF2A1P52655 AC005089.1-201ENST00000619486 2241 ntBASIC17.11■□□□□ 0.33
GTF2A1P52655 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2A1P52655 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2A1P52655 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2A1P52655 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2A1P52655 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2A1P52655 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2A1P52655 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2A1P52655 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.1■□□□□ 0.33
GTF2A1P52655 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2A1P52655 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17.1■□□□□ 0.33
GTF2A1P52655 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GTF2A1P52655 CYP2T1P-201ENST00000432607 1285 ntBASIC17.1■□□□□ 0.33
GTF2A1P52655 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.1■□□□□ 0.33
GTF2A1P52655 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2A1P52655 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.1■□□□□ 0.33
GTF2A1P52655 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.1■□□□□ 0.33
GTF2A1P52655 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.1■□□□□ 0.33
GTF2A1P52655 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2A1P52655 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
GTF2A1P52655 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GTF2A1P52655 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
GTF2A1P52655 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2A1P52655 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
GTF2A1P52655 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2A1P52655 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.1■□□□□ 0.33
GTF2A1P52655 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2A1P52655 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GTF2A1P52655 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2A1P52655 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2A1P52655 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GTF2A1P52655 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GTF2A1P52655 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2A1P52655 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2A1P52655 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.1■□□□□ 0.33
GTF2A1P52655 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
GTF2A1P52655 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2A1P52655 SDHAP1-207ENST00000440850 2000 ntBASIC17.09■□□□□ 0.33
GTF2A1P52655 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2A1P52655 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2A1P52655 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.09■□□□□ 0.33
GTF2A1P52655 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2A1P52655 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.09■□□□□ 0.33
GTF2A1P52655 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2A1P52655 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
GTF2A1P52655 AC007191.1-201ENST00000623179 2995 ntBASIC17.09■□□□□ 0.33
GTF2A1P52655 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2A1P52655 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2A1P52655 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2A1P52655 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.09■□□□□ 0.33
GTF2A1P52655 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2A1P52655 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2A1P52655 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.09■□□□□ 0.33
GTF2A1P52655 AC069236.1-201ENST00000604339 616 ntBASIC17.09■□□□□ 0.33
GTF2A1P52655 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.09■□□□□ 0.33
GTF2A1P52655 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.09■□□□□ 0.33
GTF2A1P52655 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2A1P52655 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
GTF2A1P52655 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.09■□□□□ 0.33
GTF2A1P52655 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2A1P52655 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2A1P52655 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2A1P52655 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.09■□□□□ 0.33
GTF2A1P52655 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.09■□□□□ 0.33
GTF2A1P52655 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.09■□□□□ 0.33
GTF2A1P52655 TFP1-202ENST00000475455 1573 ntBASIC17.09■□□□□ 0.33
GTF2A1P52655 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2A1P52655 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2A1P52655 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2A1P52655 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
GTF2A1P52655 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2A1P52655 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2A1P52655 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.09■□□□□ 0.33
GTF2A1P52655 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2A1P52655 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2A1P52655 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
GTF2A1P52655 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms