Protein–RNA interactions for Protein: P49336

CDK8, Cyclin-dependent kinase 8, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK8P49336 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.34■□□□□ 0.85
CDK8P49336 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.34■□□□□ 0.85
CDK8P49336 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CDK8P49336 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDK8P49336 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CDK8P49336 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDK8P49336 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CDK8P49336 RPSAP43-201ENST00000402237 625 ntBASIC20.33■□□□□ 0.85
CDK8P49336 MIR1233-2-201ENST00000408138 82 ntBASIC20.33■□□□□ 0.85
CDK8P49336 MIR1233-1-201ENST00000408722 82 ntBASIC20.33■□□□□ 0.85
CDK8P49336 UPF3AP3-201ENST00000420996 769 ntBASIC20.33■□□□□ 0.85
CDK8P49336 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.33■□□□□ 0.85
CDK8P49336 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.33■□□□□ 0.85
CDK8P49336 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.33■□□□□ 0.85
CDK8P49336 PAWRP1-201ENST00000451083 565 ntBASIC20.33■□□□□ 0.85
CDK8P49336 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.33■□□□□ 0.85
CDK8P49336 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDK8P49336 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.33■□□□□ 0.85
CDK8P49336 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.33■□□□□ 0.85
CDK8P49336 AC002347.1-201ENST00000569543 541 ntBASIC20.33■□□□□ 0.85
CDK8P49336 AC010327.4-202ENST00000591484 748 ntBASIC20.33■□□□□ 0.85
CDK8P49336 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.33■□□□□ 0.85
CDK8P49336 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDK8P49336 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDK8P49336 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDK8P49336 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
CDK8P49336 AC018470.1-201ENST00000624790 3129 ntBASIC20.33■□□□□ 0.84
CDK8P49336 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK8P49336 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK8P49336 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CDK8P49336 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.32■□□□□ 0.84
CDK8P49336 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK8P49336 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CDK8P49336 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDK8P49336 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK8P49336 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CDK8P49336 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK8P49336 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK8P49336 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK8P49336 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.32■□□□□ 0.84
CDK8P49336 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.32■□□□□ 0.84
CDK8P49336 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.32■□□□□ 0.84
CDK8P49336 AC112482.1-201ENST00000492080 688 ntBASIC20.32■□□□□ 0.84
CDK8P49336 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.32■□□□□ 0.84
CDK8P49336 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
CDK8P49336 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDK8P49336 AC055717.3-201ENST00000622967 595 ntBASIC20.32■□□□□ 0.84
CDK8P49336 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDK8P49336 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK8P49336 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.32■□□□□ 0.84
CDK8P49336 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.32■□□□□ 0.84
CDK8P49336 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDK8P49336 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK8P49336 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK8P49336 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDK8P49336 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK8P49336 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK8P49336 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.31■□□□□ 0.84
CDK8P49336 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK8P49336 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.31■□□□□ 0.84
CDK8P49336 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK8P49336 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CDK8P49336 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.31■□□□□ 0.84
CDK8P49336 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.31■□□□□ 0.84
CDK8P49336 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.31■□□□□ 0.84
CDK8P49336 GPX1P2-201ENST00000429271 606 ntBASIC20.31■□□□□ 0.84
CDK8P49336 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDK8P49336 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.31■□□□□ 0.84
CDK8P49336 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.31■□□□□ 0.84
CDK8P49336 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.31■□□□□ 0.84
CDK8P49336 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.31■□□□□ 0.84
CDK8P49336 AC010507.1-201ENST00000633895 436 ntBASIC20.31■□□□□ 0.84
CDK8P49336 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK8P49336 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK8P49336 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK8P49336 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.31■□□□□ 0.84
CDK8P49336 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CDK8P49336 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CDK8P49336 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK8P49336 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.31■□□□□ 0.84
CDK8P49336 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDK8P49336 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK8P49336 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CDK8P49336 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CDK8P49336 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CDK8P49336 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
CDK8P49336 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK8P49336 NOC2LP2-201ENST00000407594 1944 ntBASIC20.3■□□□□ 0.84
CDK8P49336 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK8P49336 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CDK8P49336 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK8P49336 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDK8P49336 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CDK8P49336 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CDK8P49336 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CDK8P49336 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.3■□□□□ 0.84
CDK8P49336 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.3■□□□□ 0.84
CDK8P49336 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.3■□□□□ 0.84
CDK8P49336 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.3■□□□□ 0.84
CDK8P49336 AL513190.1-201ENST00000621254 727 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms