Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.57■□□□□ 0.4
CHRNA4P43681 KRT18P31-201ENST00000506277 1292 ntBASIC17.57■□□□□ 0.4
CHRNA4P43681 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.57■□□□□ 0.4
CHRNA4P43681 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA4P43681 PRELID1P1-202ENST00000567272 903 ntBASIC17.57■□□□□ 0.4
CHRNA4P43681 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CHRNA4P43681 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA4P43681 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA4P43681 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA4P43681 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CHRNA4P43681 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA4P43681 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA4P43681 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.57■□□□□ 0.4
CHRNA4P43681 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA4P43681 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA4P43681 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA4P43681 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA4P43681 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.57■□□□□ 0.4
CHRNA4P43681 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.57■□□□□ 0.4
CHRNA4P43681 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA4P43681 AC022211.2-201ENST00000585075 2527 ntBASIC17.57■□□□□ 0.4
CHRNA4P43681 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CHRNA4P43681 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA4P43681 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.57■□□□□ 0.4
CHRNA4P43681 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.57■□□□□ 0.4
CHRNA4P43681 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA4P43681 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.56■□□□□ 0.4
CHRNA4P43681 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA4P43681 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CHRNA4P43681 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CHRNA4P43681 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA4P43681 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA4P43681 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA4P43681 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA4P43681 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA4P43681 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA4P43681 AC003669.1-201ENST00000334569 611 ntBASIC17.56■□□□□ 0.4
CHRNA4P43681 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA4P43681 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CHRNA4P43681 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA4P43681 TSPY19P-201ENST00000418461 509 ntBASIC17.56■□□□□ 0.4
CHRNA4P43681 TSPY18P-201ENST00000441642 509 ntBASIC17.56■□□□□ 0.4
CHRNA4P43681 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.56■□□□□ 0.4
CHRNA4P43681 KRT18P56-201ENST00000507275 550 ntBASIC17.56■□□□□ 0.4
CHRNA4P43681 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA4P43681 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA4P43681 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CHRNA4P43681 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.56■□□□□ 0.4
CHRNA4P43681 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA4P43681 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA4P43681 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA4P43681 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA4P43681 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA4P43681 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA4P43681 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
CHRNA4P43681 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.56■□□□□ 0.4
CHRNA4P43681 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA4P43681 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA4P43681 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.55■□□□□ 0.4
CHRNA4P43681 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
CHRNA4P43681 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA4P43681 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA4P43681 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA4P43681 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA4P43681 AL135999.2-201ENST00000622438 1686 ntBASIC17.55■□□□□ 0.4
CHRNA4P43681 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.55■□□□□ 0.4
CHRNA4P43681 PCDHA12-202ENST00000613593 2588 ntBASIC17.55■□□□□ 0.4
CHRNA4P43681 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.55■□□□□ 0.4
CHRNA4P43681 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA4P43681 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA4P43681 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA4P43681 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.55■□□□□ 0.4
CHRNA4P43681 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA4P43681 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.55■□□□□ 0.4
CHRNA4P43681 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA4P43681 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA4P43681 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.55■□□□□ 0.4
CHRNA4P43681 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.55■□□□□ 0.4
CHRNA4P43681 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.55■□□□□ 0.4
CHRNA4P43681 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA4P43681 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CHRNA4P43681 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CHRNA4P43681 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA4P43681 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA4P43681 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA4P43681 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.55■□□□□ 0.4
CHRNA4P43681 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA4P43681 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.55■□□□□ 0.4
CHRNA4P43681 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA4P43681 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA4P43681 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA4P43681 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA4P43681 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.55■□□□□ 0.4
CHRNA4P43681 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA4P43681 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA4P43681 AC004817.3-201ENST00000602957 2129 ntBASIC17.54■□□□□ 0.4
CHRNA4P43681 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CHRNA4P43681 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA4P43681 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA4P43681 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms