Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COPB2P35606 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COPB2P35606 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COPB2P35606 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
COPB2P35606 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COPB2P35606 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.84■□□□□ 0.77
COPB2P35606 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
COPB2P35606 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
COPB2P35606 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.84■□□□□ 0.77
COPB2P35606 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.84■□□□□ 0.77
COPB2P35606 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
COPB2P35606 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COPB2P35606 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
COPB2P35606 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.84■□□□□ 0.77
COPB2P35606 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COPB2P35606 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COPB2P35606 CXCL1P1-201ENST00000502804 216 ntBASIC19.84■□□□□ 0.77
COPB2P35606 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.84■□□□□ 0.77
COPB2P35606 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.84■□□□□ 0.77
COPB2P35606 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.84■□□□□ 0.77
COPB2P35606 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COPB2P35606 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COPB2P35606 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
COPB2P35606 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.84■□□□□ 0.77
COPB2P35606 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.84■□□□□ 0.77
COPB2P35606 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COPB2P35606 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
COPB2P35606 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COPB2P35606 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.83■□□□□ 0.77
COPB2P35606 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COPB2P35606 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COPB2P35606 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.83■□□□□ 0.77
COPB2P35606 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.83■□□□□ 0.77
COPB2P35606 BICD1-207ENST00000551848 1962 ntBASIC19.83■□□□□ 0.77
COPB2P35606 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COPB2P35606 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COPB2P35606 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.83■□□□□ 0.77
COPB2P35606 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COPB2P35606 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COPB2P35606 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.83■□□□□ 0.77
COPB2P35606 HMGN1P19-201ENST00000436976 333 ntBASIC19.83■□□□□ 0.77
COPB2P35606 METTL21AP1-201ENST00000438852 635 ntBASIC19.83■□□□□ 0.77
COPB2P35606 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
COPB2P35606 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COPB2P35606 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.83■□□□□ 0.77
COPB2P35606 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.83■□□□□ 0.77
COPB2P35606 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.83■□□□□ 0.77
COPB2P35606 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
COPB2P35606 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.83■□□□□ 0.77
COPB2P35606 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
COPB2P35606 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COPB2P35606 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
COPB2P35606 AC046185.3-201ENST00000623228 1824 ntBASIC19.83■□□□□ 0.76
COPB2P35606 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
COPB2P35606 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
COPB2P35606 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
COPB2P35606 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.83■□□□□ 0.76
COPB2P35606 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COPB2P35606 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COPB2P35606 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COPB2P35606 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COPB2P35606 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.82■□□□□ 0.76
COPB2P35606 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.82■□□□□ 0.76
COPB2P35606 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.82■□□□□ 0.76
COPB2P35606 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.82■□□□□ 0.76
COPB2P35606 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.82■□□□□ 0.76
COPB2P35606 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.82■□□□□ 0.76
COPB2P35606 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COPB2P35606 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.82■□□□□ 0.76
COPB2P35606 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.82■□□□□ 0.76
COPB2P35606 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COPB2P35606 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COPB2P35606 AC025580.3-201ENST00000617932 1424 ntBASIC19.82■□□□□ 0.76
COPB2P35606 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COPB2P35606 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COPB2P35606 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COPB2P35606 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.82■□□□□ 0.76
COPB2P35606 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.82■□□□□ 0.76
COPB2P35606 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COPB2P35606 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COPB2P35606 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPB2P35606 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.81■□□□□ 0.76
COPB2P35606 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
COPB2P35606 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPB2P35606 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.81■□□□□ 0.76
COPB2P35606 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COPB2P35606 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COPB2P35606 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.81■□□□□ 0.76
COPB2P35606 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPB2P35606 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPB2P35606 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPB2P35606 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPB2P35606 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPB2P35606 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPB2P35606 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.81■□□□□ 0.76
COPB2P35606 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.81■□□□□ 0.76
COPB2P35606 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.81■□□□□ 0.76
COPB2P35606 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.81■□□□□ 0.76
COPB2P35606 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.81■□□□□ 0.76
COPB2P35606 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms