Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AP001059.3-201ENST00000619053 235 ntBASIC19.58■□□□□ 0.73
COL11A1P12107 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.58■□□□□ 0.73
COL11A1P12107 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL11A1P12107 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL11A1P12107 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.58■□□□□ 0.72
COL11A1P12107 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
COL11A1P12107 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.58■□□□□ 0.72
COL11A1P12107 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL11A1P12107 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
COL11A1P12107 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
COL11A1P12107 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL11A1P12107 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.58■□□□□ 0.72
COL11A1P12107 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.58■□□□□ 0.72
COL11A1P12107 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.58■□□□□ 0.72
COL11A1P12107 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.58■□□□□ 0.72
COL11A1P12107 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.58■□□□□ 0.72
COL11A1P12107 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL11A1P12107 LINC02084-201ENST00000606069 1096 ntBASIC19.58■□□□□ 0.72
COL11A1P12107 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.58■□□□□ 0.72
COL11A1P12107 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.57■□□□□ 0.72
COL11A1P12107 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL11A1P12107 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL11A1P12107 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL11A1P12107 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
COL11A1P12107 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL11A1P12107 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL11A1P12107 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL11A1P12107 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL11A1P12107 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.57■□□□□ 0.72
COL11A1P12107 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
COL11A1P12107 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
COL11A1P12107 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.57■□□□□ 0.72
COL11A1P12107 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.57■□□□□ 0.72
COL11A1P12107 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL11A1P12107 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.57■□□□□ 0.72
COL11A1P12107 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
COL11A1P12107 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
COL11A1P12107 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL11A1P12107 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.57■□□□□ 0.72
COL11A1P12107 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL11A1P12107 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.56■□□□□ 0.72
COL11A1P12107 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL11A1P12107 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL11A1P12107 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL11A1P12107 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL11A1P12107 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL11A1P12107 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.56■□□□□ 0.72
COL11A1P12107 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.56■□□□□ 0.72
COL11A1P12107 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL11A1P12107 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.56■□□□□ 0.72
COL11A1P12107 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
COL11A1P12107 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.56■□□□□ 0.72
COL11A1P12107 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL11A1P12107 EGFEM1P-202ENST00000431685 1563 ntBASIC19.56■□□□□ 0.72
COL11A1P12107 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.56■□□□□ 0.72
COL11A1P12107 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL11A1P12107 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.56■□□□□ 0.72
COL11A1P12107 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL11A1P12107 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
COL11A1P12107 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.55■□□□□ 0.72
COL11A1P12107 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
COL11A1P12107 RARRES2P8-201ENST00000566335 367 ntBASIC19.55■□□□□ 0.72
COL11A1P12107 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
COL11A1P12107 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL11A1P12107 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL11A1P12107 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL11A1P12107 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL11A1P12107 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.55■□□□□ 0.72
COL11A1P12107 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
COL11A1P12107 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
COL11A1P12107 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.55■□□□□ 0.72
COL11A1P12107 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
COL11A1P12107 SLC22A20-204ENST00000530038 1673 ntBASIC19.55■□□□□ 0.72
COL11A1P12107 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL11A1P12107 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.55■□□□□ 0.72
COL11A1P12107 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.55■□□□□ 0.72
COL11A1P12107 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL11A1P12107 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL11A1P12107 MIR770-201ENST00000390219 98 ntBASIC19.55■□□□□ 0.72
COL11A1P12107 GPS2P2-201ENST00000430745 888 ntBASIC19.55■□□□□ 0.72
COL11A1P12107 FAM185BP-201ENST00000443595 716 ntBASIC19.55■□□□□ 0.72
COL11A1P12107 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.55■□□□□ 0.72
COL11A1P12107 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.55■□□□□ 0.72
COL11A1P12107 AL645728.2-201ENST00000641974 660 ntBASIC19.55■□□□□ 0.72
COL11A1P12107 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL11A1P12107 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
COL11A1P12107 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL11A1P12107 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
COL11A1P12107 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.54■□□□□ 0.72
COL11A1P12107 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL11A1P12107 AKAP8P1-201ENST00000434743 1349 ntBASIC19.54■□□□□ 0.72
COL11A1P12107 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL11A1P12107 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
COL11A1P12107 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL11A1P12107 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
COL11A1P12107 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.54■□□□□ 0.72
COL11A1P12107 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.54■□□□□ 0.72
COL11A1P12107 AL096865.1-201ENST00000606796 927 ntBASIC19.54■□□□□ 0.72
COL11A1P12107 AC026120.1-201ENST00000611536 926 ntBASIC19.54■□□□□ 0.72
COL11A1P12107 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms