Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC3P02656 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
APOC3P02656 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC3P02656 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC3P02656 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOC3P02656 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
APOC3P02656 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC3P02656 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC3P02656 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOC3P02656 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC3P02656 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
APOC3P02656 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC3P02656 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC3P02656 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.99□□□□□ -0.17
APOC3P02656 AC087386.2-201ENST00000623212 4637 ntBASIC13.99□□□□□ -0.17
APOC3P02656 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
APOC3P02656 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC3P02656 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
APOC3P02656 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.99□□□□□ -0.17
APOC3P02656 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.99□□□□□ -0.17
APOC3P02656 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
APOC3P02656 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOC3P02656 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
APOC3P02656 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC3P02656 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.99□□□□□ -0.17
APOC3P02656 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.99□□□□□ -0.17
APOC3P02656 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.99□□□□□ -0.17
APOC3P02656 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.99□□□□□ -0.17
APOC3P02656 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.99□□□□□ -0.17
APOC3P02656 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.99□□□□□ -0.17
APOC3P02656 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
APOC3P02656 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
APOC3P02656 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC3P02656 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.99□□□□□ -0.17
APOC3P02656 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
APOC3P02656 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOC3P02656 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
APOC3P02656 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC3P02656 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.98□□□□□ -0.17
APOC3P02656 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC3P02656 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.98□□□□□ -0.17
APOC3P02656 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC3P02656 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC3P02656 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
APOC3P02656 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOC3P02656 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC13.98□□□□□ -0.17
APOC3P02656 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
APOC3P02656 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC3P02656 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC3P02656 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC3P02656 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.98□□□□□ -0.17
APOC3P02656 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC3P02656 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.98□□□□□ -0.17
APOC3P02656 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC3P02656 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.98□□□□□ -0.17
APOC3P02656 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC13.98□□□□□ -0.17
APOC3P02656 GUK1-208ENST00000366728 842 ntTSL 2 BASIC13.98□□□□□ -0.17
APOC3P02656 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
APOC3P02656 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC13.98□□□□□ -0.17
APOC3P02656 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC13.98□□□□□ -0.17
APOC3P02656 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC13.98□□□□□ -0.17
APOC3P02656 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC3P02656 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC3P02656 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOC3P02656 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC3P02656 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC3P02656 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC3P02656 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
APOC3P02656 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
APOC3P02656 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC3P02656 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
APOC3P02656 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC3P02656 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
APOC3P02656 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC3P02656 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
APOC3P02656 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
APOC3P02656 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC3P02656 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC3P02656 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.98□□□□□ -0.17
APOC3P02656 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.98□□□□□ -0.17
APOC3P02656 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
APOC3P02656 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
APOC3P02656 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
APOC3P02656 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.97□□□□□ -0.17
APOC3P02656 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.97□□□□□ -0.17
APOC3P02656 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 MPST-204ENST00000404393 1329 ntTSL 5 BASIC13.97□□□□□ -0.17
APOC3P02656 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.97□□□□□ -0.17
APOC3P02656 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.97□□□□□ -0.17
APOC3P02656 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms