Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZBED1O96006 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
ZBED1O96006 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZBED1O96006 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.43■□□□□ 0.54
ZBED1O96006 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.43■□□□□ 0.54
ZBED1O96006 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZBED1O96006 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZBED1O96006 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZBED1O96006 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
ZBED1O96006 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZBED1O96006 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.42■□□□□ 0.54
ZBED1O96006 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZBED1O96006 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.42■□□□□ 0.54
ZBED1O96006 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZBED1O96006 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
ZBED1O96006 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZBED1O96006 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZBED1O96006 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
ZBED1O96006 AL160237.2-201ENST00000556165 472 ntBASIC18.42■□□□□ 0.54
ZBED1O96006 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.42■□□□□ 0.54
ZBED1O96006 STK25P1-201ENST00000585406 838 ntBASIC18.42■□□□□ 0.54
ZBED1O96006 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
ZBED1O96006 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.42■□□□□ 0.54
ZBED1O96006 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZBED1O96006 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ZBED1O96006 AL356309.3-201ENST00000624132 1934 ntBASIC18.42■□□□□ 0.54
ZBED1O96006 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZBED1O96006 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZBED1O96006 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZBED1O96006 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
ZBED1O96006 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZBED1O96006 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.42■□□□□ 0.54
ZBED1O96006 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZBED1O96006 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZBED1O96006 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZBED1O96006 AC079776.2-201ENST00000641154 1609 ntBASIC18.41■□□□□ 0.54
ZBED1O96006 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ZBED1O96006 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.41■□□□□ 0.54
ZBED1O96006 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZBED1O96006 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ZBED1O96006 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZBED1O96006 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.41■□□□□ 0.54
ZBED1O96006 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZBED1O96006 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZBED1O96006 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.41■□□□□ 0.54
ZBED1O96006 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ZBED1O96006 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZBED1O96006 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ZBED1O96006 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.41■□□□□ 0.54
ZBED1O96006 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZBED1O96006 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.41■□□□□ 0.54
ZBED1O96006 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ZBED1O96006 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.41■□□□□ 0.54
ZBED1O96006 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZBED1O96006 SPDYE21P-201ENST00000413323 827 ntBASIC18.41■□□□□ 0.54
ZBED1O96006 SCARNA2-201ENST00000458748 420 ntBASIC18.41■□□□□ 0.54
ZBED1O96006 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
ZBED1O96006 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.41■□□□□ 0.54
ZBED1O96006 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZBED1O96006 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZBED1O96006 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZBED1O96006 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZBED1O96006 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
ZBED1O96006 HLA-J-201ENST00000462773 1622 ntBASIC18.41■□□□□ 0.54
ZBED1O96006 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZBED1O96006 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZBED1O96006 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZBED1O96006 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZBED1O96006 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.4■□□□□ 0.54
ZBED1O96006 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZBED1O96006 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZBED1O96006 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZBED1O96006 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZBED1O96006 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ZBED1O96006 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZBED1O96006 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.4■□□□□ 0.54
ZBED1O96006 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZBED1O96006 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZBED1O96006 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZBED1O96006 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZBED1O96006 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZBED1O96006 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZBED1O96006 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZBED1O96006 AC003669.1-201ENST00000334569 611 ntBASIC18.4■□□□□ 0.54
ZBED1O96006 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
ZBED1O96006 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.4■□□□□ 0.54
ZBED1O96006 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
ZBED1O96006 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZBED1O96006 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.4■□□□□ 0.54
ZBED1O96006 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.4■□□□□ 0.54
ZBED1O96006 AL139288.1-201ENST00000623748 933 ntBASIC18.4■□□□□ 0.54
ZBED1O96006 AC073592.4-201ENST00000623827 446 ntBASIC18.4■□□□□ 0.54
ZBED1O96006 TP73-AS1-207ENST00000624167 988 ntBASIC18.4■□□□□ 0.54
ZBED1O96006 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZBED1O96006 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZBED1O96006 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.4■□□□□ 0.54
ZBED1O96006 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZBED1O96006 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZBED1O96006 AC133963.1-201ENST00000504166 1679 ntBASIC18.4■□□□□ 0.54
ZBED1O96006 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms