Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.99■□□□□ 0.79
MBD3O95983 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.99■□□□□ 0.79
MBD3O95983 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.99■□□□□ 0.79
MBD3O95983 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.99■□□□□ 0.79
MBD3O95983 NEK4P2-201ENST00000580004 1012 ntBASIC19.99■□□□□ 0.79
MBD3O95983 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.99■□□□□ 0.79
MBD3O95983 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MBD3O95983 AC024563.2-201ENST00000603282 481 ntBASIC19.99■□□□□ 0.79
MBD3O95983 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MBD3O95983 AL049637.2-201ENST00000641778 930 ntBASIC19.99■□□□□ 0.79
MBD3O95983 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MBD3O95983 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.99■□□□□ 0.79
MBD3O95983 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
MBD3O95983 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
MBD3O95983 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MBD3O95983 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MBD3O95983 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MBD3O95983 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.99■□□□□ 0.79
MBD3O95983 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MBD3O95983 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MBD3O95983 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.99■□□□□ 0.79
MBD3O95983 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.99■□□□□ 0.79
MBD3O95983 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
MBD3O95983 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MBD3O95983 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
MBD3O95983 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD3O95983 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD3O95983 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
MBD3O95983 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MBD3O95983 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD3O95983 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD3O95983 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
MBD3O95983 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD3O95983 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
MBD3O95983 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MBD3O95983 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.98■□□□□ 0.79
MBD3O95983 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD3O95983 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD3O95983 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MBD3O95983 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
MBD3O95983 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD3O95983 AC233702.5-201ENST00000584107 538 ntBASIC19.98■□□□□ 0.79
MBD3O95983 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.98■□□□□ 0.79
MBD3O95983 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.98■□□□□ 0.79
MBD3O95983 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD3O95983 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD3O95983 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD3O95983 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.98■□□□□ 0.79
MBD3O95983 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
MBD3O95983 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD3O95983 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.98■□□□□ 0.79
MBD3O95983 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD3O95983 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.98■□□□□ 0.79
MBD3O95983 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD3O95983 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD3O95983 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD3O95983 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD3O95983 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.98■□□□□ 0.79
MBD3O95983 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
MBD3O95983 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD3O95983 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD3O95983 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MBD3O95983 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
MBD3O95983 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MBD3O95983 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
MBD3O95983 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.97■□□□□ 0.79
MBD3O95983 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.97■□□□□ 0.79
MBD3O95983 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
MBD3O95983 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MBD3O95983 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MBD3O95983 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.97■□□□□ 0.79
MBD3O95983 RBM17P1-201ENST00000453646 1190 ntBASIC19.97■□□□□ 0.79
MBD3O95983 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.97■□□□□ 0.79
MBD3O95983 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.97■□□□□ 0.79
MBD3O95983 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MBD3O95983 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
MBD3O95983 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
MBD3O95983 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.97■□□□□ 0.79
MBD3O95983 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MBD3O95983 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.97■□□□□ 0.79
MBD3O95983 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.97■□□□□ 0.79
MBD3O95983 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
MBD3O95983 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.97■□□□□ 0.79
MBD3O95983 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MBD3O95983 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
MBD3O95983 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MBD3O95983 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
MBD3O95983 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
MBD3O95983 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MBD3O95983 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
MBD3O95983 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC19.96■□□□□ 0.79
MBD3O95983 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
MBD3O95983 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.96■□□□□ 0.79
MBD3O95983 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.96■□□□□ 0.79
MBD3O95983 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.96■□□□□ 0.79
MBD3O95983 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MBD3O95983 ID1-201ENST00000376105 1233 ntBASIC19.96■□□□□ 0.79
MBD3O95983 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.96■□□□□ 0.79
MBD3O95983 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.96■□□□□ 0.79
MBD3O95983 FITM1-202ENST00000559294 800 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms