Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT3HO75486 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT3HO75486 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.32■□□□□ 0.36
SUPT3HO75486 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT3HO75486 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT3HO75486 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT3HO75486 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT3HO75486 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT3HO75486 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.32■□□□□ 0.36
SUPT3HO75486 AC104076.2-201ENST00000448912 469 ntBASIC17.32■□□□□ 0.36
SUPT3HO75486 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT3HO75486 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
SUPT3HO75486 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT3HO75486 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.32■□□□□ 0.36
SUPT3HO75486 AC083849.1-201ENST00000615227 514 ntBASIC17.32■□□□□ 0.36
SUPT3HO75486 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.32■□□□□ 0.36
SUPT3HO75486 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT3HO75486 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SUPT3HO75486 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT3HO75486 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT3HO75486 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT3HO75486 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT3HO75486 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT3HO75486 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
SUPT3HO75486 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SUPT3HO75486 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.31■□□□□ 0.36
SUPT3HO75486 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUPT3HO75486 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.31■□□□□ 0.36
SUPT3HO75486 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SUPT3HO75486 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.31■□□□□ 0.36
SUPT3HO75486 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUPT3HO75486 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUPT3HO75486 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUPT3HO75486 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SUPT3HO75486 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SUPT3HO75486 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.31■□□□□ 0.36
SUPT3HO75486 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SUPT3HO75486 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUPT3HO75486 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.31■□□□□ 0.36
SUPT3HO75486 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.31■□□□□ 0.36
SUPT3HO75486 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.31■□□□□ 0.36
SUPT3HO75486 AC063952.2-201ENST00000498792 1227 ntBASIC17.31■□□□□ 0.36
SUPT3HO75486 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.31■□□□□ 0.36
SUPT3HO75486 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SUPT3HO75486 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.31■□□□□ 0.36
SUPT3HO75486 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SUPT3HO75486 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.31■□□□□ 0.36
SUPT3HO75486 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
SUPT3HO75486 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.31■□□□□ 0.36
SUPT3HO75486 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.31■□□□□ 0.36
SUPT3HO75486 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUPT3HO75486 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SUPT3HO75486 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.31■□□□□ 0.36
SUPT3HO75486 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUPT3HO75486 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUPT3HO75486 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.3■□□□□ 0.36
SUPT3HO75486 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SUPT3HO75486 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SUPT3HO75486 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SUPT3HO75486 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUPT3HO75486 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUPT3HO75486 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SUPT3HO75486 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.3■□□□□ 0.36
SUPT3HO75486 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUPT3HO75486 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUPT3HO75486 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SUPT3HO75486 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.3■□□□□ 0.36
SUPT3HO75486 SPDYE13P-201ENST00000445314 798 ntBASIC17.3■□□□□ 0.36
SUPT3HO75486 AL671277.2-201ENST00000458060 996 ntBASIC17.3■□□□□ 0.36
SUPT3HO75486 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.3■□□□□ 0.36
SUPT3HO75486 AC022616.7-201ENST00000525383 220 ntBASIC17.3■□□□□ 0.36
SUPT3HO75486 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.3■□□□□ 0.36
SUPT3HO75486 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.3■□□□□ 0.36
SUPT3HO75486 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.3■□□□□ 0.36
SUPT3HO75486 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUPT3HO75486 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.3■□□□□ 0.36
SUPT3HO75486 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SUPT3HO75486 LYSMD4-203ENST00000378904 2122 ntBASIC17.3■□□□□ 0.36
SUPT3HO75486 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SUPT3HO75486 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.3■□□□□ 0.36
SUPT3HO75486 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SUPT3HO75486 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.3■□□□□ 0.36
SUPT3HO75486 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.3■□□□□ 0.36
SUPT3HO75486 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.3■□□□□ 0.36
SUPT3HO75486 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.29■□□□□ 0.36
SUPT3HO75486 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SUPT3HO75486 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SUPT3HO75486 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SUPT3HO75486 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.29■□□□□ 0.36
SUPT3HO75486 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SUPT3HO75486 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SUPT3HO75486 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SUPT3HO75486 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SUPT3HO75486 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SUPT3HO75486 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SUPT3HO75486 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SUPT3HO75486 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.29■□□□□ 0.36
SUPT3HO75486 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.29■□□□□ 0.36
SUPT3HO75486 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.29■□□□□ 0.36
SUPT3HO75486 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms