Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 MMAA-201ENST00000281317 7068 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 AC097381.1-201ENST00000429019 1296 ntBASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 AK3-203ENST00000447596 705 ntTSL 2 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 FLJ13224-201ENST00000313737 1514 ntBASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 CA12-203ENST00000422263 2556 ntTSL 2 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
CHKB-CPT1BH3BT56 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 AC092384.3-202ENST00000564646 2873 ntBASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 FEM1AP3-201ENST00000403722 1741 ntBASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC9.65□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms