Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.22■□□□□ 0.03
MBD3L3A6NE82 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MBD3L3A6NE82 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MBD3L3A6NE82 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.22■□□□□ 0.03
MBD3L3A6NE82 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.22■□□□□ 0.03
MBD3L3A6NE82 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.22■□□□□ 0.03
MBD3L3A6NE82 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.22■□□□□ 0.03
MBD3L3A6NE82 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.22■□□□□ 0.03
MBD3L3A6NE82 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.22■□□□□ 0.03
MBD3L3A6NE82 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.22■□□□□ 0.03
MBD3L3A6NE82 SLC25A6P2-201ENST00000497974 877 ntBASIC15.22■□□□□ 0.03
MBD3L3A6NE82 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.22■□□□□ 0.03
MBD3L3A6NE82 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.22■□□□□ 0.03
MBD3L3A6NE82 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.22■□□□□ 0.03
MBD3L3A6NE82 AL078644.1-201ENST00000609881 752 ntBASIC15.22■□□□□ 0.03
MBD3L3A6NE82 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MBD3L3A6NE82 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MBD3L3A6NE82 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.22■□□□□ 0.03
MBD3L3A6NE82 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MBD3L3A6NE82 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MBD3L3A6NE82 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
MBD3L3A6NE82 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MBD3L3A6NE82 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.22■□□□□ 0.03
MBD3L3A6NE82 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MBD3L3A6NE82 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
MBD3L3A6NE82 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MBD3L3A6NE82 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MBD3L3A6NE82 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MBD3L3A6NE82 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.21■□□□□ 0.03
MBD3L3A6NE82 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
MBD3L3A6NE82 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.21■□□□□ 0.03
MBD3L3A6NE82 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MBD3L3A6NE82 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MBD3L3A6NE82 AC254562.1-201ENST00000417586 456 ntBASIC15.21■□□□□ 0.03
MBD3L3A6NE82 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
MBD3L3A6NE82 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.21■□□□□ 0.03
MBD3L3A6NE82 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
MBD3L3A6NE82 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.21■□□□□ 0.03
MBD3L3A6NE82 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MBD3L3A6NE82 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MBD3L3A6NE82 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.21■□□□□ 0.03
MBD3L3A6NE82 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.21■□□□□ 0.03
MBD3L3A6NE82 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.21■□□□□ 0.03
MBD3L3A6NE82 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.21■□□□□ 0.03
MBD3L3A6NE82 ACTL9-202ENST00000612068 1252 ntBASIC15.21■□□□□ 0.03
MBD3L3A6NE82 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.21■□□□□ 0.03
MBD3L3A6NE82 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MBD3L3A6NE82 AL390961.4-201ENST00000623958 2535 ntBASIC15.21■□□□□ 0.03
MBD3L3A6NE82 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.21■□□□□ 0.03
MBD3L3A6NE82 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.21■□□□□ 0.03
MBD3L3A6NE82 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
MBD3L3A6NE82 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
MBD3L3A6NE82 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MBD3L3A6NE82 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
MBD3L3A6NE82 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.21■□□□□ 0.02
MBD3L3A6NE82 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
MBD3L3A6NE82 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
MBD3L3A6NE82 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 ACTG1P14-201ENST00000446382 1122 ntBASIC15.2■□□□□ 0.02
MBD3L3A6NE82 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD3L3A6NE82 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MBD3L3A6NE82 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.19■□□□□ 0.02
MBD3L3A6NE82 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
MBD3L3A6NE82 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MBD3L3A6NE82 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MBD3L3A6NE82 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms