Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
HTR3EA5X5Y0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.21■□□□□ 0.18
HTR3EA5X5Y0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.21■□□□□ 0.18
HTR3EA5X5Y0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 HLA-J-201ENST00000462773 1622 ntBASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 AL391807.1-203ENST00000604392 2365 ntBASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 HLA-F-220ENST00000434407 884 ntBASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 BX664615.1-201ENST00000443558 458 ntBASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 ATP5G1P1-201ENST00000448724 379 ntBASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 CROCCP1-201ENST00000426910 5675 ntBASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
HTR3EA5X5Y0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 AC087499.1-201ENST00000418141 1075 ntBASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 AL596275.1-201ENST00000423464 877 ntBASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.19■□□□□ 0.18
HTR3EA5X5Y0 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HTR3EA5X5Y0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HTR3EA5X5Y0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HTR3EA5X5Y0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HTR3EA5X5Y0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HTR3EA5X5Y0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HTR3EA5X5Y0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.18■□□□□ 0.18
HTR3EA5X5Y0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HTR3EA5X5Y0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HTR3EA5X5Y0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HTR3EA5X5Y0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HTR3EA5X5Y0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.18■□□□□ 0.18
HTR3EA5X5Y0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms